| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3555 |
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| Symbol | |
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| ID | 8334908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3969357 |
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| End bp | 3971108 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644956698 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003114301 |
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| Protein GI | 256392737 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGCATG ACACCCACGC TCCGCCGAAC CCCTCCGACC CCGCGAAGTC CGTCCAGGGA
GCGCCGCTCC AAGACTGGTC GCACCTGGAC CCCAAGCGCT GGCTGGCGCT CGCGGTGATC
CTGATCGCCG CGTTCATGGA CCTGCTCGAC GCCACCATCG TGAACGTCGC GATCCCGAGC
ATGCAGGACA ACCTGCACGC CCGGTACTCC GACATCGAGT GGATCGTCGC GGCCTACGCC
CTGTCCTTCG CCGCGATGCT GATCACCGGC GGGCGGCTCG GCGACATCTT CGGACGCAAG
CTGATCTTCA TGGTCGGCGT GCTCGGATTC ACCGCCTCCT CGGTCCTGTG CGGACTGGCG
CAGACCCCTG GCGAGCTCAT CGGCGCCCGC TTCGCGCAGG GCGCGATGGC CGGCCTGATG
GTGCCGCAGG TGCTCTCGAT CATCCACGTC ACCTTCCCGC CGAACGAGCG CGGCAAGGTC
TTCGGCATGT TCGGCGGGAT CGTCGGATCG GCCTCGGTGT TCGGCCCGAT CCTGGGCGGC
CTGCTGGTCC AGTGGAACGT GAACAACCTG CACTGGCGGC CGATCTTCCT GGTCAACCTG
CCGGTCGGGC TGCTGGCGCT GATCCCGGCG TACTTCGTGA TCCGGGAGTC CAAGTCCCCG
ACGGCGCCCC GGCTGGACCT GTTCGGCATG GTGCTGGCCA TCGCCGCCGT GGTCCTGGTC
GCCTACCCGC TGACCGAGGG GCGCTCGGAC GGCTGGCCGC TGTCGGGCTA CCTGATGATG
GCCGCGGCGG CGCCGGTGCT GATCGTGTTC GTGCTCTACG AACGGTGGCG CACCGGCCGG
GCCGGGTCGC CGCTGGTGGT CCTGAGCCTG TTCCGGCAGC GGTCCTTCGA CGCCGGGCTG
AGCGTCTGGC TGATCTTCAA CGTGGCGCTG TCCGGCTTCT TCCTGGTCTG GACCCTCTAC
ATGCAGATCG GCCTGGGCTG GACCCCGATC CACTCCGGGC TGACCGGCAT CATCTTCGCC
TTCGGCGCCG CGCCCGCGGC CGGCGCCTCG GTGCAGGTGC TGACCCCGAA GTTCGGCCGC
AAGGTCCTGA TGGCCGGCGC GCTGCTGAAC GCGGCGGGCT TCGCGGTCTT CATCTACATG
GCGGCGCACT TCGGCACCAA GATCACCACC TGGGAGATGA TCCCGCCGCT GTTGGTCGCC
GGCGTCGGGT TCGGGCTGGT GGTCGCGCCG ATCACCGACC TGGTGCTCTC CGACGTCCCG
ACCGCGGACG CCGGCAGCGC CTCGGGCGTG TTCAGCACGG TGCAGCAGGT CGGCGCCGCG
CTGGGCATCG CGCTGATCGG CGTGATCTTC TTCTCCCAGC TGAACACCCA GTCCCACAAG
GCCGTGGACG CCGTGACCCC GAAGCTTCGC AGCACCCTGA GCGCGGCCGG ACTCCCGGGA
CCGGCGGTGG ACGGTGTGGT GGCCGACTTC GGCACCTGCA TCCGCGACCG CTCCGCGGCC
ACCGACCCGA CCTCCGTCCC GCCGAGCTGC CAGAAGAATC CCGTCCAGAT GGGGGTCGAC
CCCGCGACCG CCGGCCAGGT CACCGCCATC TTGACCACCA GCAGCCAGTC CGCCGCCGGC
GAGGACTTCT GGCGCGGCTT CGGGGTCACC CTGGTCTGGA TGATCGGGGA CCTGCTCCTG
GTGTTCCTCG GCATGTTCGC CCTGCCGAAG AAGGTCCGGG AGATCGACCC GGCGGAGAAG
GCCTGGGCCT GA
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| Protein sequence | MVHDTHAPPN PSDPAKSVQG APLQDWSHLD PKRWLALAVI LIAAFMDLLD ATIVNVAIPS
MQDNLHARYS DIEWIVAAYA LSFAAMLITG GRLGDIFGRK LIFMVGVLGF TASSVLCGLA
QTPGELIGAR FAQGAMAGLM VPQVLSIIHV TFPPNERGKV FGMFGGIVGS ASVFGPILGG
LLVQWNVNNL HWRPIFLVNL PVGLLALIPA YFVIRESKSP TAPRLDLFGM VLAIAAVVLV
AYPLTEGRSD GWPLSGYLMM AAAAPVLIVF VLYERWRTGR AGSPLVVLSL FRQRSFDAGL
SVWLIFNVAL SGFFLVWTLY MQIGLGWTPI HSGLTGIIFA FGAAPAAGAS VQVLTPKFGR
KVLMAGALLN AAGFAVFIYM AAHFGTKITT WEMIPPLLVA GVGFGLVVAP ITDLVLSDVP
TADAGSASGV FSTVQQVGAA LGIALIGVIF FSQLNTQSHK AVDAVTPKLR STLSAAGLPG
PAVDGVVADF GTCIRDRSAA TDPTSVPPSC QKNPVQMGVD PATAGQVTAI LTTSSQSAAG
EDFWRGFGVT LVWMIGDLLL VFLGMFALPK KVREIDPAEK AWA
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