Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3484 |
Symbol | |
ID | 8334837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3875504 |
End bp | 3876691 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644956628 |
Product | response regulator receiver modulated serine phosphatase |
Protein accession | YP_003114231 |
Protein GI | 256392667 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCTCG CGACCGCGGG CCGGCCGGCC ACCGAACCCC CGTCCGACGA CGGCTTCCGC CTCGTCCTCG TCGAGGACGA CCTCGGCGAC GCCGTCCTGG TCGAGGAGAT GCTCTCCGAC ACCGGCCTTC GCTACTCCCT GACCGTGGCG CGCAGTCTGT CCGAGGCGCT GACCGTCCTG CGCCGCCAGG ACTGCGACTG TGTCCTGCTG GACCTGCACC TGCCCGACGC CAGCGGTCTG CCGCTGCTGC GCGCGGTCCA GCGGGCCGTC CCGGACGTGG CCGTCATCGT CCTGACCGGA CTGGCCGACC CGCACAGCGG CGAGGCCGCC GTGGCCTCCG GCGCGCAGGA CTACCTGGTC AAGGACCACG TGGACGCGCA GATAATGCGG CGCGCGCTGC GCTACGCGAT GAGCCGCAAA CTGGCCGAGC ACGCCACCGC CGAGCTGATG CGCAACCAGC TGCGCGCCGA GGAGAACGTG CGCCTGGAGC GCGGTCTGCT GCCGGCGCCG CTGCTGGACT CGCCGCGCCT GCGGGCCACG ACGCGCTATC TGCCCAGCCG GGAGGCGGCG CTGCTCGGCG GCGACTTCCT GGACATCGTC CAGGACGCCG ACGGCGCGGT GCACGCCGTC ATCGGCGACG TCAGCGGGCA CGGCCCGGAC GAGGCCGCGC TCGGCGTCTG CCTGCGCATC ACCTGGCGCG CGCTGACCCT GGCCGGCCAC CGCGACCTGG AACTGCTCGC CCTGCTCGAA AAGGTGCTGG TCGCCGAGCG CACGCACCCT GCCATGTTCG CCACCTGCAC GATCCTGACG CTGGACCCGC ACGCGGGCAC GGTCTCGGTG ATCCTCGCCG GCCACCACGA ACCGCTGCTG ATCGGTGCGC ACAAGGCCGA GAACCTGCCC GCCGCCTACG GCATGGCCCT GGGTATCGCC CCCGGCCGCC ACGAGTGGCG CCGCAGCGAG TTCGCCCTGC CGCCCCGCGG CGCCCTGCTG CTCTACACCG ACGGCCTCAT CGAGGGCCAC GCCGGCCCGG ACGGCCAACG CCTCGGCGCG GCCGGGCTGG GGGACCTGAT CGCCCAGGCG CCGCGGCTGG AACCGGGCGA GTTCCTGGAC CATCTCATCA ATGCGGCGCA GTCCTTGAAC GCCGACCGGC ACGCCGACGA CCTCGCAATA CTTCATCTGG CATGGTGA
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Protein sequence | MNLATAGRPA TEPPSDDGFR LVLVEDDLGD AVLVEEMLSD TGLRYSLTVA RSLSEALTVL RRQDCDCVLL DLHLPDASGL PLLRAVQRAV PDVAVIVLTG LADPHSGEAA VASGAQDYLV KDHVDAQIMR RALRYAMSRK LAEHATAELM RNQLRAEENV RLERGLLPAP LLDSPRLRAT TRYLPSREAA LLGGDFLDIV QDADGAVHAV IGDVSGHGPD EAALGVCLRI TWRALTLAGH RDLELLALLE KVLVAERTHP AMFATCTILT LDPHAGTVSV ILAGHHEPLL IGAHKAENLP AAYGMALGIA PGRHEWRRSE FALPPRGALL LYTDGLIEGH AGPDGQRLGA AGLGDLIAQA PRLEPGEFLD HLINAAQSLN ADRHADDLAI LHLAW
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