Gene Caci_3484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3484 
Symbol 
ID8334837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3875504 
End bp3876691 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content73% 
IMG OID644956628 
Productresponse regulator receiver modulated serine phosphatase 
Protein accessionYP_003114231 
Protein GI256392667 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCTCG CGACCGCGGG CCGGCCGGCC ACCGAACCCC CGTCCGACGA CGGCTTCCGC 
CTCGTCCTCG TCGAGGACGA CCTCGGCGAC GCCGTCCTGG TCGAGGAGAT GCTCTCCGAC
ACCGGCCTTC GCTACTCCCT GACCGTGGCG CGCAGTCTGT CCGAGGCGCT GACCGTCCTG
CGCCGCCAGG ACTGCGACTG TGTCCTGCTG GACCTGCACC TGCCCGACGC CAGCGGTCTG
CCGCTGCTGC GCGCGGTCCA GCGGGCCGTC CCGGACGTGG CCGTCATCGT CCTGACCGGA
CTGGCCGACC CGCACAGCGG CGAGGCCGCC GTGGCCTCCG GCGCGCAGGA CTACCTGGTC
AAGGACCACG TGGACGCGCA GATAATGCGG CGCGCGCTGC GCTACGCGAT GAGCCGCAAA
CTGGCCGAGC ACGCCACCGC CGAGCTGATG CGCAACCAGC TGCGCGCCGA GGAGAACGTG
CGCCTGGAGC GCGGTCTGCT GCCGGCGCCG CTGCTGGACT CGCCGCGCCT GCGGGCCACG
ACGCGCTATC TGCCCAGCCG GGAGGCGGCG CTGCTCGGCG GCGACTTCCT GGACATCGTC
CAGGACGCCG ACGGCGCGGT GCACGCCGTC ATCGGCGACG TCAGCGGGCA CGGCCCGGAC
GAGGCCGCGC TCGGCGTCTG CCTGCGCATC ACCTGGCGCG CGCTGACCCT GGCCGGCCAC
CGCGACCTGG AACTGCTCGC CCTGCTCGAA AAGGTGCTGG TCGCCGAGCG CACGCACCCT
GCCATGTTCG CCACCTGCAC GATCCTGACG CTGGACCCGC ACGCGGGCAC GGTCTCGGTG
ATCCTCGCCG GCCACCACGA ACCGCTGCTG ATCGGTGCGC ACAAGGCCGA GAACCTGCCC
GCCGCCTACG GCATGGCCCT GGGTATCGCC CCCGGCCGCC ACGAGTGGCG CCGCAGCGAG
TTCGCCCTGC CGCCCCGCGG CGCCCTGCTG CTCTACACCG ACGGCCTCAT CGAGGGCCAC
GCCGGCCCGG ACGGCCAACG CCTCGGCGCG GCCGGGCTGG GGGACCTGAT CGCCCAGGCG
CCGCGGCTGG AACCGGGCGA GTTCCTGGAC CATCTCATCA ATGCGGCGCA GTCCTTGAAC
GCCGACCGGC ACGCCGACGA CCTCGCAATA CTTCATCTGG CATGGTGA
 
Protein sequence
MNLATAGRPA TEPPSDDGFR LVLVEDDLGD AVLVEEMLSD TGLRYSLTVA RSLSEALTVL 
RRQDCDCVLL DLHLPDASGL PLLRAVQRAV PDVAVIVLTG LADPHSGEAA VASGAQDYLV
KDHVDAQIMR RALRYAMSRK LAEHATAELM RNQLRAEENV RLERGLLPAP LLDSPRLRAT
TRYLPSREAA LLGGDFLDIV QDADGAVHAV IGDVSGHGPD EAALGVCLRI TWRALTLAGH
RDLELLALLE KVLVAERTHP AMFATCTILT LDPHAGTVSV ILAGHHEPLL IGAHKAENLP
AAYGMALGIA PGRHEWRRSE FALPPRGALL LYTDGLIEGH AGPDGQRLGA AGLGDLIAQA
PRLEPGEFLD HLINAAQSLN ADRHADDLAI LHLAW