Gene Caci_3474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3474 
Symbol 
ID8334827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3866184 
End bp3867299 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content69% 
IMG OID644956618 
ProductMethyltransferase type 12 
Protein accessionYP_003114221 
Protein GI256392657 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.253351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTGG GTGCCACCGA AGAGCCCGAG ACCACTCGCG CCGGGGCGAT CGCCGCGAGG 
CGTCCGGCGT ACGAAGCCGA TCTCGAGGAC GGCGTCGAAC GGTTCTTCGA ACCGCGCCGG
GCCGTCTGCG CGTGGTGCGG CTCCGGGCGG CTTCGCGAAC GGCTGCACAC CACGGACCTG
CTCCAGCACA AACCCGGCGC CTTCCGGCTG GACCGATGCC TGGATTGCGG GCACATCTTT
CAGAATCCGC GCTTGAACGC CGATGGGCTG GAGTTCTACT ACCGCGATTT CTACGACGGG
CTCGGGGAGA AGAGCACCGC GGGTCTGTTC GCGGGGCGCG GGGCTACGTA CCGGCGGCGT
GCTGAGGCGC TGCTGCCGTA CACGGGCTTG AACACGAACA CTGATATAGA CACTCACGCG
CTGGACAGCT GGCTGGACGT GGGCACCGGA CACGGTCACT TCTGCGAGGC GGCGCGCGAA
GTCTTCCCGC AGACCGCGTT CGACGGCCTG GACTTCACCG ACGGCGCCGA ACTGGCCGAG
AAGGCAGGTC GCGTCCGGCG CGGGTATCGG GGCAGCTTCG TCGAGGTCGC GGCGGCGGTG
GCTGGGACGT ACGACGTGGT GAGCATGTTC CATTACTTGG AACACAGCGT GGAGCCCGCG
ATGGAACTGG AGGCCGCGCG CTTGGCGCTG CGTCCTGGCG GATATCTGTT GATCGAGGTC
CCTGATGCCG CGAGCCGGTA CTCCCGGCTG CTCGGCCGGC GGTGGCTGCC CTGGCTCCAA
CCGCAGCATC TGCACTTCCT GCCGGTGCGC AACCTCCGCG ATCGCTTGGC CGCGCTCGGT
TTCACCGTGG TGGCCGAACA GCACGCCGAG GCGCACGATC GCGTGGATCT GCTTGCCGCG
ACCTGGCTCG TGCTGGACGG CATCGCCCCG CGCGACGAGG TGCCGTGGCT GGCGCGGCGA
CCGGGGAGGG GGAAGCGCGC GGCGCGTGCG ATGGTGGTGA TGCTGGGCAT CCCGGTGCTG
CTCGCGGCGA CGATCCTGGA CCGGATCATT CCCAGTGCTC TGATACGCCG CCTGGGGCTG
TCGAACGCGT ACCGGGTGGT CGCGCGGCGC GACTGA
 
Protein sequence
MRVGATEEPE TTRAGAIAAR RPAYEADLED GVERFFEPRR AVCAWCGSGR LRERLHTTDL 
LQHKPGAFRL DRCLDCGHIF QNPRLNADGL EFYYRDFYDG LGEKSTAGLF AGRGATYRRR
AEALLPYTGL NTNTDIDTHA LDSWLDVGTG HGHFCEAARE VFPQTAFDGL DFTDGAELAE
KAGRVRRGYR GSFVEVAAAV AGTYDVVSMF HYLEHSVEPA MELEAARLAL RPGGYLLIEV
PDAASRYSRL LGRRWLPWLQ PQHLHFLPVR NLRDRLAALG FTVVAEQHAE AHDRVDLLAA
TWLVLDGIAP RDEVPWLARR PGRGKRAARA MVVMLGIPVL LAATILDRII PSALIRRLGL
SNAYRVVARR D