Gene Caci_3454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3454 
Symbol 
ID8334807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3825110 
End bp3829129 
Gene Length4020 bp 
Protein Length1339 aa 
Translation table11 
GC content71% 
IMG OID644956598 
Productamino acid adenylation domain protein 
Protein accessionYP_003114201 
Protein GI256392637 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1020] Non-ribosomal peptide synthetase modules and related proteins 
TIGRFAM ID[TIGR01733] amino acid adenylation domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0624608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000205264 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGTTCTG AGATCCAAGA CCAGTACGAG CTGTCTCCGC TCCAGCAGGG GATCTTGTTC 
CACAGCCTGT ACGACGGCGA CTCCGACAGC TACGTCAACC AGCGCAGCTT CCTGATCGAC
GGGCCGCTGG ACGCCGACGC GCTGGTGGCG GCGTGGGAGG CGGCGACGCG GGCGCACAGC
GTGCTGCGGA CGTCGTTCCA CTGGGAGGGC GCGGCGGATC CGGTGCAGCG TGTGCATCGG
GAGATGCCGC CGGCGGTGAC GCGGCACGAC TGGAGCGGCG CGCCGGACGC GGTGGACCGG
TTCGACGCGT TGCTGGGCGA GGATCGGGCG GCCGGGTTCG ATCCGGCTTC GCCGCCGTTG
CAGCGGCTGC ATGTCATCCG GTTCGGCGAC GACAGCCACG GGCTGGTGTG GACGCACCAC
CTGCTGCTGC TCGACGGATG GTCGACGCCG GTGCTGATGG GGGATGTGCT GGGGCGCTAT
CTGGCGGCGA CGGCCGGGCT GCCGGAGCCG GAGGCGGCGC CGCCGTTCGG GGACTACATC
GCTTGGCTGC GTCGGCAGGA TTTGAATGCG GCGCGCGCTT TCTGGGCCGA GGCGCTATCG
GGCTGGAGCG GCGCGACGCG GCTGGGTCCG CTGCGTCCCG CCGATCCGGG CGCGGAGGTC
GGACCGGTCG CCGAGCACGC GGTGGAGCTG CCGTCGGGTG CGGAGGCGCG GCTGCGAGCG
GCGGCGGCCG CGCATCGGGT GACGCTCAAC ACCCTGCTAC ACGCCGCGTG GGCGCTGGTA
CTCCAGCGGT ACAGCGGCGA GGCGGAGGTC ACGTTCGGCG TGACCAGCTC GAACCGCCCG
CCGGAGCTGC CGCGGGTGGA ACAGATGGTC GGGCTGTTCA CCAACACCCT GCCGGTCCGG
GTGGCGGTGC CCGACGCCGG GGAGCTCGGG CCCTGGCTGC AGCGGATGCA GGCGGAGTAC
GCGGCGGTGC GCAGGTACGA ATTCAGCCCA CTGTCACAGG TGAAGAGCTG GATCGGAGCG
CCGGGCGGGC AGCCGCTGTT CGAGAGCCTG GTGATCTTCG ACAACTACTC ACTCGCGATG
GGAACGACGC CGATCCCCGG GCTGCCGACC CTGGTACCGC TGGACGTGTT CGAGAAGACG
AGCCAGCCGC TGGTGCTGCT GGTAACGCCG CAGCCGACCT TCTCGCTGCG GCTGCGCTGG
CACCGGGATC GCTTCGCGGC GGGGGCGGCG GAGCGGATGC TGGAGGACTT CCGGGCGGCG
CTGGTGGGGA TGGCGGGGGC GGGGCGGGTT GAGGAGGTCG CGGCGGGGTT GGTGCGGGGT
GGCGGTGCCC GCGGCGGAGT CGACGCCAGG TCCGGAGCTG GGGCTGGCGG CGGGCTCACA
TCGCAAGGCC CTGTGACTGT GTTCCCAGAT GCTGGCTGCA CGTTGCCCGA ATTGTTCGAG
CGGCGGGTGG CGGTGGCGCC TGATGCCGTT GCGGTGGTTG GGGGCGAGGG TGGGCGGGTG
CGGTATCGGG AGTTGGCTGG GCGGGCTCGG GGTGTGGCGG CCGCGTTGGT TGCTGCGGGG
GTTGGGCGGG GGGATGTGGT CGGCGTCTGT GCCGAGCGGT CGGTGGAGAT GGTGGCGGCG
CTGGTGGGGG TGGGGTTAGC GGGTGCCGCT TATTTGCCGT TGGAGCCGAC GTTGCCGGGT
GAGCGGTTGG CGTTCATGGT TGGTGAGGCG GGGGCTCGGG TGGTGCTGGC GCAGCGGGGG
TGTGCCGAGG TTGTGTGGGG TGGCGGGGGT GGCAGGGTTC TGATTCTGGA GGATGTTGCG
GAGGTCTCGG AGCTGGTTGG GGTCTCTGCG GCTCGCAGTG ATGACACCGC GTATGTCATC
TATACCTCCG GCTCGACTGG GCGTCCTAAG GGCGCCGCGA TCAGCCATCG TGCGATCGTG
AACCGGTTGC TGTGGATGCA GGACACGTTT GCGCTGACGT CGGAAGATCG AGTGTTGCAG
AAGACACCTT TTGGCTTCGA CGTGTCGGTG TGGGAGGTGT TCTGGCCGCT GATCGCCGGG
GCGACGATGG TGCTGGCGCG GCCGGGCGGG CATCAGGATG CTGAGTATCT GACGCAGGTG
ATCGAGCGTC AGGCGGTCAC GACCGCGCAT TTCGTGCCCT CGATGCTGCA GCTGTTCCTG
GACGAGCCGA AGGCTGCGGA GTGCGGGCTG CGGCGGGTGG TGTGCAGCGG CGAGGCGCTG
TCGTATCCGC TGGCGGAGCG CTTCGGCGAA GCGTTGCCGC ACACCGAGCT GCACAACTTG
TACGGACCGA CCGAGGCGGC GGTGGACGTC ACCTGGTGGG ACTGCGCGCG TCCGGTGGCG
GAGGCGGGGA TCGTGCCGAT CGGGGAGCCG ATCGCGAATA CGCGGGCGTA CGTCCTGGAC
CGGCGGCTGG CTGAGGCGCC GGACGGCGTG CCGGGTGAGC TGTATCTGGC TGGCGTGCAG
CTGGCGCGCG GGTATGTGGG ACGTCCAGGG CTGACGGCGG CGGCGTTCGT CGCGCATCCG
CTGGCGGGTG ACGGCGGGAG GCTGTACCGC ACCGGCGACC GGGTGCGACG GCTGCCGGAC
GGGGCGCTGG ACTTCCTCGG GCGGGTGGAT CGGCAGGTCA AGATTCACGG GTACCGGGTG
GAGCCGGGTG AGGTCGAGCA GGCGCTTGCG GCACATCCAG CCGTGAAGGA GGCGGCTGTC
GTGGTGCGGG AGGCGCCTGG CGGGCCGAGG CTGGCGGCAT ATGTGACGGC AGTGGCTACT
GGGAAATCAG GCCTCGATGT CGCGGCGCTC CGCGACCACC TCCGCACCCG CCTTCCCCGC
TATATGCTGC CGGCGACGAT CACCGTTCTG CCCGTGATGC CCTTGTCTCA CAACGGAAAG
CTGCTGCGCG CCGCACTCCC CGATCCGTCC AGCGCCGCAG TCGCCGAGCA CTCTGCGGTT
CCGACCACGG TGCGCGAACA AGCCGTCGCC GACGTCTTCC GCGACGTGCT CGGTTTGGCG
GAGGTCGATG CCGCTGTGGG CTTCTTCGAT CTCGGCGGCA CGTCTTTCGA CGCGGTCCGT
GCCATCCGCC GCATCGAGGG CGCCAGTGTC GCGTTGCTCG GTGCGCATCC GAGTGTGCGG
GAGTTGGCGG CGGCGCTGGA CGGTCCGCCG CCGGAGGAGG ATCGACGGCT GGTCCGGCTC
ACCGGCGCAC GGCCGGCCGC AGGGAACCTG GTGTGCGTCC CGTACGGCGG CGGCAGCGCC
ATCACCTACC GCCGTCTCGC CGACGCGCTC CCCGAGGGGC TGGCGCTACT CGCGCTCGCC
GTCCCCGGGC ACGAGCTCGG CGCCGACGAC GAACCCCGGC CGATCCAGGA CGTAGCGCGC
GACGCCGCCG AAGCGGTGGC GAAGGTCGTC GACGGGCCGG TGGCGGTGTA CGGGCACTGC
GCCGGCGTCG CGCTCGCCGT GGAGTTGGCG CGCTGCCTGG AGGAGTCCGG GCGGCCGGTG
CAGCGGCTGT TCCTCGGCGG CGCCTATCCG TTCGGCCAGC CGGGGTGGTT CGGGCGCGCG
GTCAGGGCGA CGGTGGGTGC GCTGGTCCGT GCCGGGCTCT GGCGGATCTC GGCGGCGTCG
GTCGGGACGA CCGGCGGCGG ACGGCGTGCC GACCGGGCCG AGATGCGCTA CCTGCGCCGG
ATCGGCGGGT TCGACGGCGT GGTGGAGGAC GAGGAACTGG CGTTCGTGAT GCGCGCGTTT
CGGCACGACG TGGCCGAGGG CGGCCGGTAT TTCTCAGAGC ACTGGCTTTC CGGGCGCACC
GAGCCGCTCG CCACCCCGAT CACGTTCCTG TCCGGGAGCG CCGATCCGAT GACGCCGCGA
CCCGAGCGGC GCTACCGGCT GTGGGAGCGG TTCGGCGCGG GGGTCGAGGC GGTCTCGGTC
GAGGGCGGCG GGCACTACTT CCATCAGGAG CAGCCCGACG CCGTCGCCGA GATCATCGTG
GCCGCGTTGA CGGGAGATGC AGAGGAGAAC GGCGGTGTCG GCGAAGCAAC CGCCGGATGA
 
Protein sequence
MSSEIQDQYE LSPLQQGILF HSLYDGDSDS YVNQRSFLID GPLDADALVA AWEAATRAHS 
VLRTSFHWEG AADPVQRVHR EMPPAVTRHD WSGAPDAVDR FDALLGEDRA AGFDPASPPL
QRLHVIRFGD DSHGLVWTHH LLLLDGWSTP VLMGDVLGRY LAATAGLPEP EAAPPFGDYI
AWLRRQDLNA ARAFWAEALS GWSGATRLGP LRPADPGAEV GPVAEHAVEL PSGAEARLRA
AAAAHRVTLN TLLHAAWALV LQRYSGEAEV TFGVTSSNRP PELPRVEQMV GLFTNTLPVR
VAVPDAGELG PWLQRMQAEY AAVRRYEFSP LSQVKSWIGA PGGQPLFESL VIFDNYSLAM
GTTPIPGLPT LVPLDVFEKT SQPLVLLVTP QPTFSLRLRW HRDRFAAGAA ERMLEDFRAA
LVGMAGAGRV EEVAAGLVRG GGARGGVDAR SGAGAGGGLT SQGPVTVFPD AGCTLPELFE
RRVAVAPDAV AVVGGEGGRV RYRELAGRAR GVAAALVAAG VGRGDVVGVC AERSVEMVAA
LVGVGLAGAA YLPLEPTLPG ERLAFMVGEA GARVVLAQRG CAEVVWGGGG GRVLILEDVA
EVSELVGVSA ARSDDTAYVI YTSGSTGRPK GAAISHRAIV NRLLWMQDTF ALTSEDRVLQ
KTPFGFDVSV WEVFWPLIAG ATMVLARPGG HQDAEYLTQV IERQAVTTAH FVPSMLQLFL
DEPKAAECGL RRVVCSGEAL SYPLAERFGE ALPHTELHNL YGPTEAAVDV TWWDCARPVA
EAGIVPIGEP IANTRAYVLD RRLAEAPDGV PGELYLAGVQ LARGYVGRPG LTAAAFVAHP
LAGDGGRLYR TGDRVRRLPD GALDFLGRVD RQVKIHGYRV EPGEVEQALA AHPAVKEAAV
VVREAPGGPR LAAYVTAVAT GKSGLDVAAL RDHLRTRLPR YMLPATITVL PVMPLSHNGK
LLRAALPDPS SAAVAEHSAV PTTVREQAVA DVFRDVLGLA EVDAAVGFFD LGGTSFDAVR
AIRRIEGASV ALLGAHPSVR ELAAALDGPP PEEDRRLVRL TGARPAAGNL VCVPYGGGSA
ITYRRLADAL PEGLALLALA VPGHELGADD EPRPIQDVAR DAAEAVAKVV DGPVAVYGHC
AGVALAVELA RCLEESGRPV QRLFLGGAYP FGQPGWFGRA VRATVGALVR AGLWRISAAS
VGTTGGGRRA DRAEMRYLRR IGGFDGVVED EELAFVMRAF RHDVAEGGRY FSEHWLSGRT
EPLATPITFL SGSADPMTPR PERRYRLWER FGAGVEAVSV EGGGHYFHQE QPDAVAEIIV
AALTGDAEEN GGVGEATAG