Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3454 |
Symbol | |
ID | 8334807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3825110 |
End bp | 3829129 |
Gene Length | 4020 bp |
Protein Length | 1339 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644956598 |
Product | amino acid adenylation domain protein |
Protein accession | YP_003114201 |
Protein GI | 256392637 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0624608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000205264 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGTTCTG AGATCCAAGA CCAGTACGAG CTGTCTCCGC TCCAGCAGGG GATCTTGTTC CACAGCCTGT ACGACGGCGA CTCCGACAGC TACGTCAACC AGCGCAGCTT CCTGATCGAC GGGCCGCTGG ACGCCGACGC GCTGGTGGCG GCGTGGGAGG CGGCGACGCG GGCGCACAGC GTGCTGCGGA CGTCGTTCCA CTGGGAGGGC GCGGCGGATC CGGTGCAGCG TGTGCATCGG GAGATGCCGC CGGCGGTGAC GCGGCACGAC TGGAGCGGCG CGCCGGACGC GGTGGACCGG TTCGACGCGT TGCTGGGCGA GGATCGGGCG GCCGGGTTCG ATCCGGCTTC GCCGCCGTTG CAGCGGCTGC ATGTCATCCG GTTCGGCGAC GACAGCCACG GGCTGGTGTG GACGCACCAC CTGCTGCTGC TCGACGGATG GTCGACGCCG GTGCTGATGG GGGATGTGCT GGGGCGCTAT CTGGCGGCGA CGGCCGGGCT GCCGGAGCCG GAGGCGGCGC CGCCGTTCGG GGACTACATC GCTTGGCTGC GTCGGCAGGA TTTGAATGCG GCGCGCGCTT TCTGGGCCGA GGCGCTATCG GGCTGGAGCG GCGCGACGCG GCTGGGTCCG CTGCGTCCCG CCGATCCGGG CGCGGAGGTC GGACCGGTCG CCGAGCACGC GGTGGAGCTG CCGTCGGGTG CGGAGGCGCG GCTGCGAGCG GCGGCGGCCG CGCATCGGGT GACGCTCAAC ACCCTGCTAC ACGCCGCGTG GGCGCTGGTA CTCCAGCGGT ACAGCGGCGA GGCGGAGGTC ACGTTCGGCG TGACCAGCTC GAACCGCCCG CCGGAGCTGC CGCGGGTGGA ACAGATGGTC GGGCTGTTCA CCAACACCCT GCCGGTCCGG GTGGCGGTGC CCGACGCCGG GGAGCTCGGG CCCTGGCTGC AGCGGATGCA GGCGGAGTAC GCGGCGGTGC GCAGGTACGA ATTCAGCCCA CTGTCACAGG TGAAGAGCTG GATCGGAGCG CCGGGCGGGC AGCCGCTGTT CGAGAGCCTG GTGATCTTCG ACAACTACTC ACTCGCGATG GGAACGACGC CGATCCCCGG GCTGCCGACC CTGGTACCGC TGGACGTGTT CGAGAAGACG AGCCAGCCGC TGGTGCTGCT GGTAACGCCG CAGCCGACCT TCTCGCTGCG GCTGCGCTGG CACCGGGATC GCTTCGCGGC GGGGGCGGCG GAGCGGATGC TGGAGGACTT CCGGGCGGCG CTGGTGGGGA TGGCGGGGGC GGGGCGGGTT GAGGAGGTCG CGGCGGGGTT GGTGCGGGGT GGCGGTGCCC GCGGCGGAGT CGACGCCAGG TCCGGAGCTG GGGCTGGCGG CGGGCTCACA TCGCAAGGCC CTGTGACTGT GTTCCCAGAT GCTGGCTGCA CGTTGCCCGA ATTGTTCGAG CGGCGGGTGG CGGTGGCGCC TGATGCCGTT GCGGTGGTTG GGGGCGAGGG TGGGCGGGTG CGGTATCGGG AGTTGGCTGG GCGGGCTCGG GGTGTGGCGG CCGCGTTGGT TGCTGCGGGG GTTGGGCGGG GGGATGTGGT CGGCGTCTGT GCCGAGCGGT CGGTGGAGAT GGTGGCGGCG CTGGTGGGGG TGGGGTTAGC GGGTGCCGCT TATTTGCCGT TGGAGCCGAC GTTGCCGGGT GAGCGGTTGG CGTTCATGGT TGGTGAGGCG GGGGCTCGGG TGGTGCTGGC GCAGCGGGGG TGTGCCGAGG TTGTGTGGGG TGGCGGGGGT GGCAGGGTTC TGATTCTGGA GGATGTTGCG GAGGTCTCGG AGCTGGTTGG GGTCTCTGCG GCTCGCAGTG ATGACACCGC GTATGTCATC TATACCTCCG GCTCGACTGG GCGTCCTAAG GGCGCCGCGA TCAGCCATCG TGCGATCGTG AACCGGTTGC TGTGGATGCA GGACACGTTT GCGCTGACGT CGGAAGATCG AGTGTTGCAG AAGACACCTT TTGGCTTCGA CGTGTCGGTG TGGGAGGTGT TCTGGCCGCT GATCGCCGGG GCGACGATGG TGCTGGCGCG GCCGGGCGGG CATCAGGATG CTGAGTATCT GACGCAGGTG ATCGAGCGTC AGGCGGTCAC GACCGCGCAT TTCGTGCCCT CGATGCTGCA GCTGTTCCTG GACGAGCCGA AGGCTGCGGA GTGCGGGCTG CGGCGGGTGG TGTGCAGCGG CGAGGCGCTG TCGTATCCGC TGGCGGAGCG CTTCGGCGAA GCGTTGCCGC ACACCGAGCT GCACAACTTG TACGGACCGA CCGAGGCGGC GGTGGACGTC ACCTGGTGGG ACTGCGCGCG TCCGGTGGCG GAGGCGGGGA TCGTGCCGAT CGGGGAGCCG ATCGCGAATA CGCGGGCGTA CGTCCTGGAC CGGCGGCTGG CTGAGGCGCC GGACGGCGTG CCGGGTGAGC TGTATCTGGC TGGCGTGCAG CTGGCGCGCG GGTATGTGGG ACGTCCAGGG CTGACGGCGG CGGCGTTCGT CGCGCATCCG CTGGCGGGTG ACGGCGGGAG GCTGTACCGC ACCGGCGACC GGGTGCGACG GCTGCCGGAC GGGGCGCTGG ACTTCCTCGG GCGGGTGGAT CGGCAGGTCA AGATTCACGG GTACCGGGTG GAGCCGGGTG AGGTCGAGCA GGCGCTTGCG GCACATCCAG CCGTGAAGGA GGCGGCTGTC GTGGTGCGGG AGGCGCCTGG CGGGCCGAGG CTGGCGGCAT ATGTGACGGC AGTGGCTACT GGGAAATCAG GCCTCGATGT CGCGGCGCTC CGCGACCACC TCCGCACCCG CCTTCCCCGC TATATGCTGC CGGCGACGAT CACCGTTCTG CCCGTGATGC CCTTGTCTCA CAACGGAAAG CTGCTGCGCG CCGCACTCCC CGATCCGTCC AGCGCCGCAG TCGCCGAGCA CTCTGCGGTT CCGACCACGG TGCGCGAACA AGCCGTCGCC GACGTCTTCC GCGACGTGCT CGGTTTGGCG GAGGTCGATG CCGCTGTGGG CTTCTTCGAT CTCGGCGGCA CGTCTTTCGA CGCGGTCCGT GCCATCCGCC GCATCGAGGG CGCCAGTGTC GCGTTGCTCG GTGCGCATCC GAGTGTGCGG GAGTTGGCGG CGGCGCTGGA CGGTCCGCCG CCGGAGGAGG ATCGACGGCT GGTCCGGCTC ACCGGCGCAC GGCCGGCCGC AGGGAACCTG GTGTGCGTCC CGTACGGCGG CGGCAGCGCC ATCACCTACC GCCGTCTCGC CGACGCGCTC CCCGAGGGGC TGGCGCTACT CGCGCTCGCC GTCCCCGGGC ACGAGCTCGG CGCCGACGAC GAACCCCGGC CGATCCAGGA CGTAGCGCGC GACGCCGCCG AAGCGGTGGC GAAGGTCGTC GACGGGCCGG TGGCGGTGTA CGGGCACTGC GCCGGCGTCG CGCTCGCCGT GGAGTTGGCG CGCTGCCTGG AGGAGTCCGG GCGGCCGGTG CAGCGGCTGT TCCTCGGCGG CGCCTATCCG TTCGGCCAGC CGGGGTGGTT CGGGCGCGCG GTCAGGGCGA CGGTGGGTGC GCTGGTCCGT GCCGGGCTCT GGCGGATCTC GGCGGCGTCG GTCGGGACGA CCGGCGGCGG ACGGCGTGCC GACCGGGCCG AGATGCGCTA CCTGCGCCGG ATCGGCGGGT TCGACGGCGT GGTGGAGGAC GAGGAACTGG CGTTCGTGAT GCGCGCGTTT CGGCACGACG TGGCCGAGGG CGGCCGGTAT TTCTCAGAGC ACTGGCTTTC CGGGCGCACC GAGCCGCTCG CCACCCCGAT CACGTTCCTG TCCGGGAGCG CCGATCCGAT GACGCCGCGA CCCGAGCGGC GCTACCGGCT GTGGGAGCGG TTCGGCGCGG GGGTCGAGGC GGTCTCGGTC GAGGGCGGCG GGCACTACTT CCATCAGGAG CAGCCCGACG CCGTCGCCGA GATCATCGTG GCCGCGTTGA CGGGAGATGC AGAGGAGAAC GGCGGTGTCG GCGAAGCAAC CGCCGGATGA
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Protein sequence | MSSEIQDQYE LSPLQQGILF HSLYDGDSDS YVNQRSFLID GPLDADALVA AWEAATRAHS VLRTSFHWEG AADPVQRVHR EMPPAVTRHD WSGAPDAVDR FDALLGEDRA AGFDPASPPL QRLHVIRFGD DSHGLVWTHH LLLLDGWSTP VLMGDVLGRY LAATAGLPEP EAAPPFGDYI AWLRRQDLNA ARAFWAEALS GWSGATRLGP LRPADPGAEV GPVAEHAVEL PSGAEARLRA AAAAHRVTLN TLLHAAWALV LQRYSGEAEV TFGVTSSNRP PELPRVEQMV GLFTNTLPVR VAVPDAGELG PWLQRMQAEY AAVRRYEFSP LSQVKSWIGA PGGQPLFESL VIFDNYSLAM GTTPIPGLPT LVPLDVFEKT SQPLVLLVTP QPTFSLRLRW HRDRFAAGAA ERMLEDFRAA LVGMAGAGRV EEVAAGLVRG GGARGGVDAR SGAGAGGGLT SQGPVTVFPD AGCTLPELFE RRVAVAPDAV AVVGGEGGRV RYRELAGRAR GVAAALVAAG VGRGDVVGVC AERSVEMVAA LVGVGLAGAA YLPLEPTLPG ERLAFMVGEA GARVVLAQRG CAEVVWGGGG GRVLILEDVA EVSELVGVSA ARSDDTAYVI YTSGSTGRPK GAAISHRAIV NRLLWMQDTF ALTSEDRVLQ KTPFGFDVSV WEVFWPLIAG ATMVLARPGG HQDAEYLTQV IERQAVTTAH FVPSMLQLFL DEPKAAECGL RRVVCSGEAL SYPLAERFGE ALPHTELHNL YGPTEAAVDV TWWDCARPVA EAGIVPIGEP IANTRAYVLD RRLAEAPDGV PGELYLAGVQ LARGYVGRPG LTAAAFVAHP LAGDGGRLYR TGDRVRRLPD GALDFLGRVD RQVKIHGYRV EPGEVEQALA AHPAVKEAAV VVREAPGGPR LAAYVTAVAT GKSGLDVAAL RDHLRTRLPR YMLPATITVL PVMPLSHNGK LLRAALPDPS SAAVAEHSAV PTTVREQAVA DVFRDVLGLA EVDAAVGFFD LGGTSFDAVR AIRRIEGASV ALLGAHPSVR ELAAALDGPP PEEDRRLVRL TGARPAAGNL VCVPYGGGSA ITYRRLADAL PEGLALLALA VPGHELGADD EPRPIQDVAR DAAEAVAKVV DGPVAVYGHC AGVALAVELA RCLEESGRPV QRLFLGGAYP FGQPGWFGRA VRATVGALVR AGLWRISAAS VGTTGGGRRA DRAEMRYLRR IGGFDGVVED EELAFVMRAF RHDVAEGGRY FSEHWLSGRT EPLATPITFL SGSADPMTPR PERRYRLWER FGAGVEAVSV EGGGHYFHQE QPDAVAEIIV AALTGDAEEN GGVGEATAG
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