| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3378 |
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| Symbol | |
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| ID | 8334731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3729700 |
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| End bp | 3730239 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644956522 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003114125 |
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| Protein GI | 256392561 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.286962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.770498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGCTG AGCACGCGGA TTGGACAGCG GACGCCTTCA TGGCCGAGCT GTTCCGTGTG
CACTCCGGAC CGCTCCTGCG CTACCTGCTG CGCCTGACTC TGGGCGACGC GGCGCGCGCC
GAGGACCTGC TCCAGGAGAC CATGGTCCGC ATCTGGCGCC ACCCCGAGCA CTTCGGCGGC
GACGTCGAGG CCCTGCGCCC CCTGGTCTTC ACCGTCGCCC GCCGCGCCGC GATCGACGCC
GCACGAGCCC GAGGCGCCCG CCCCGCCGAA GTCTGCGAGG TCGACGAGGC AGGCTCAGAC
ACCTTCGGCG CCGAGGAGCC CGAATTCGAG CGGGTACTCC TCGCGCAGGT GGTACGCCGC
GCGCTCCTCA AACTCAGCCC CGAGCACCGA GCCATGATCA TCGAGGTCCA CTTCAACGGC
CGCACCATCG AGGAGACCGC CCACCTCCTC GGCATCCCCC TCGGCACCGC CCGCTCACGG
ACGTACCACG CAGCCCGGAA CCTGCGGCAG GCGCTGACGG ACTTGGGGTT CGAGCGGTGA
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| Protein sequence | MGAEHADWTA DAFMAELFRV HSGPLLRYLL RLTLGDAARA EDLLQETMVR IWRHPEHFGG
DVEALRPLVF TVARRAAIDA ARARGARPAE VCEVDEAGSD TFGAEEPEFE RVLLAQVVRR
ALLKLSPEHR AMIIEVHFNG RTIEETAHLL GIPLGTARSR TYHAARNLRQ ALTDLGFER
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