| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3347 |
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| Symbol | |
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| ID | 8334700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3697199 |
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| End bp | 3698599 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644956492 |
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| Product | amino acid/amide ABC transporter substrate- binding protein, HAAT family |
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| Protein accession | YP_003114095 |
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| Protein GI | 256392531 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.716666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.862215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTGA GCAGGCGCCG CCGGCGCGTC GTCCCGCTCC TGATCGCGCC CCTGGCGCTG
GCGGCGCTCG CGGCGGCGGC CACCGCCTGC GGCACTCGCC TGCCCGCCAG CGCCTTCGCC
CCCCGCCCCG GGCCGACGGC GCCCGGCAGC ACGCAGCCGC CGGCGACAGC GCCGGCGAAC
CAGAACCCCG CCAGCGACGT CGGCGTCACC CCGACCCAGA TCCGCGTCGG CATCCTCGCC
TCGCTGACCA GCCCCGTCGG CTCCGCCGCC TTCAGCGGTC CCAGCTACGG CGCGCAGGCC
TTCTTCCGCG CGCTCAACGC CGCCGGCGGC GTCCACGGCC GGACCGTCGC GGTCTCCGTG
TGCGACGACG GCGGCAGCGG TATCGGCAAC CAGGACTGCG TCCACCAGCT CATCGACCAC
GACCAGGTCT TCGCCCTGAC CGCGACCGCG GCGCTGGACT ACGCAGGGGC GGACTACGTC
AGCAAGAAGG CCGTCCCCGA CATCGGCGGC CAGCCCATCA CCACCGTCTA CGACCAGTAC
CCGCACCTGT ACGCGATCGG CGGCAGCAGC TCGCCGCGCG ACGGCCGCAC CGTCGGCTGG
AACGGCACCC TGTATCAGAG CACGGAGATC TTCCGCTTCT TCAAGCAGCG CCTGGGCTCG
GCGCGCGCCG CGGTCGTCGC CTACAACCAG GCCGACTCCA CGCGCTACGC CTCCCAGCTC
GCCGCCGGTC TGCGCGCCGA GGGGTACCAC GTCCTGTCCC AGACCGTCGA CCTGGCGCTG
CCGGGCTTCC AGGCGGTCGC GGCGGCGATG AAGGCCGACG GCAGCCAGCT GTTGTTCGAC
GCCATGGACA CCCGGGGCAA CGCAGCACTC TGCAACGCCA TGGACGCCGC CGGTGTCAGG
GTCCTGGCAA AGGTCACCAA CGTCGAGAAC TGGGGCGAGT CGGTCCGCGA GGACTACCGC
TCCTCCCCCG CCTGCCGCAA CGTGCTGTGG GCGACCTCCT CCAGCCGGAA CTACGAGGAC
GTCCAGTACC CGGCGGTCGC GCAGTTCCGC GCGGCGATGG CGCGGTACTT CCCGGACCAG
GCGTCCCAGC TGTCCGCCTG GGACCTGGAG GGCTGGGCCG CGGCGCAGTG GCTCACCGAC
GCCATCGACT CCTGCGGCGC GAACGTGACC CGCGCCTGCG TCGAGGGTTT CATGAACCGC
CCGCAGCCCT ACGACGCGCA CAACCTGATC CTGCCGGCGT CCTTCATCCC GACTCCCCCG
CCGACCGGGA CCACCCGCGC CTGCCTGAAC GCGGCGCGCT GGCAGGACTC GGCGCAGGGC
GGCAGGGGCG GGTGGGTGAC GCAGGTCGCT GACATGGACA CCACCTGCTT CGACGTGCCG
CAGCTGCCGT ACACGCCGTG A
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| Protein sequence | MQLSRRRRRV VPLLIAPLAL AALAAAATAC GTRLPASAFA PRPGPTAPGS TQPPATAPAN
QNPASDVGVT PTQIRVGILA SLTSPVGSAA FSGPSYGAQA FFRALNAAGG VHGRTVAVSV
CDDGGSGIGN QDCVHQLIDH DQVFALTATA ALDYAGADYV SKKAVPDIGG QPITTVYDQY
PHLYAIGGSS SPRDGRTVGW NGTLYQSTEI FRFFKQRLGS ARAAVVAYNQ ADSTRYASQL
AAGLRAEGYH VLSQTVDLAL PGFQAVAAAM KADGSQLLFD AMDTRGNAAL CNAMDAAGVR
VLAKVTNVEN WGESVREDYR SSPACRNVLW ATSSSRNYED VQYPAVAQFR AAMARYFPDQ
ASQLSAWDLE GWAAAQWLTD AIDSCGANVT RACVEGFMNR PQPYDAHNLI LPASFIPTPP
PTGTTRACLN AARWQDSAQG GRGGWVTQVA DMDTTCFDVP QLPYTP
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