Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3295 |
Symbol | |
ID | 8334648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3635237 |
End bp | 3636697 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644956440 |
Product | amino acid permease-associated region |
Protein accession | YP_003114043 |
Protein GI | 256392479 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTAG TCTCACCGCC GCCGGTTCGG GTGCGGGCGG ATCAGCAGCG CCTGCGGGGC GGGGCGTTGG GGTTGCTGGA CATCGCCGGG TCGACGATGG CCAATATCGG GCCGGCGATG AGCTTCTACT TCAGCTTCGG GTTTCTCGCC ACGGCGTCCG GGCTGGCTTC GCCGCTGACG ATCGTCGCGG CCGGGGTCGC GGTGGCTTTG CTGGGGAACA CGCTGGCGCA GTTCTCGCGG GCGCATCCTT CCGCCGGCAG CTTCGTCACG TTCGTCGGGA CGACGTTCGG CGGCGCGAGC GCGGTGGCGA CGGCGCTGCT GGCGGCGCTC GGCTACATCA TCGGGATCTC CGCGGTGATC GCGGTGTCCG GCGGGTTCCT GGCCACGACG CTGGAGTACT ACGCGGGGTG GAGTCCGGCG TGGGTGGTGT GGACGCTGGT GCTGACGGCA GCGTCGGCGG CGCTGATCGT GCGGGGGATC GTGCTCTCGA CGAAGGTCGC AGGGTTCTTC TTCGCGGTGG AGCTGGTGAT GCTGCTGGTG GTGTCGGTCG CGGCGATCGT CAAGCACGGC GGTCATCTGT CGGCGGCGCC GTTCCTGCCG AGCCATATCC GGGGTGGGAT GTCAGGGCTC GCCGAGGGGT TCCCGTTAGC GGTGTATCTG TTCATCGGGT GGGAGAACTC GGCGGCGTTG GCGGAGGAGA GCGAGAATCC GCGGCGCGAT GTGGGGCGCG CGGTGTTCTC CTCCATCGCG GTGATGTCGC TGAGCTATGT GCTGTTCGCC TATGCCACCG TCACAGGGTT CGGATACGAC GTGCACAAGG TCGGCGCGGC GGATGTGCCG TTCATGGTGG TCGCGCGCGG AACGTTGGGC GTCCTGGCGT TCCTGGCCTA CATCGCCGGG CTCACCTCGA CGGTCGGCTC GTTGATCGCC GGCGCGAACT CGCAGACCCG GCTGCTGTTC AACGCCGGTC GCGAGCGGCT GCTGCCGGCT TTTCTGGGCT ACGTGCATCC GACGCGGCGG ACGCCGACGA ACGCCATCCT CACGTTCATC GCCGCGGCGC TGGTCATCAT CGGCGGATGG GGTCTGGGAC ACCTCGTGGG TCATCACGGC CGGATGGACG CGACCGCCTT CTTCGCCGAG GCGTCCTCGA TGGGTTCGAT CCTGATTCTG CTGGTGTATC TCGCCGCGAA CATCGCGCTG CCGTTCTACT ACCGCAGATA CCGGCCGACC GAGTTCCGGG CTGTCCGGCA TGTGGTACTG CCGCTGCTCG GCGCGGTGGC GATCGTGGTG CCGCTTTACT ACTTGGTGAA ACCAGGGCAG CCTGCGCCGT ATAGCTGGTT CCCGTATGTC TCGCTTGCCC TGCTGGTCGC GTCCGTCGCC TACGCGTTGG TCCTGACGCG GCGCGATCCG ACGCTGGGCG AGCGGGTCGG AGCGGTCGTC GCCGACGGTT ATGAGGAATG A
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Protein sequence | MSVVSPPPVR VRADQQRLRG GALGLLDIAG STMANIGPAM SFYFSFGFLA TASGLASPLT IVAAGVAVAL LGNTLAQFSR AHPSAGSFVT FVGTTFGGAS AVATALLAAL GYIIGISAVI AVSGGFLATT LEYYAGWSPA WVVWTLVLTA ASAALIVRGI VLSTKVAGFF FAVELVMLLV VSVAAIVKHG GHLSAAPFLP SHIRGGMSGL AEGFPLAVYL FIGWENSAAL AEESENPRRD VGRAVFSSIA VMSLSYVLFA YATVTGFGYD VHKVGAADVP FMVVARGTLG VLAFLAYIAG LTSTVGSLIA GANSQTRLLF NAGRERLLPA FLGYVHPTRR TPTNAILTFI AAALVIIGGW GLGHLVGHHG RMDATAFFAE ASSMGSILIL LVYLAANIAL PFYYRRYRPT EFRAVRHVVL PLLGAVAIVV PLYYLVKPGQ PAPYSWFPYV SLALLVASVA YALVLTRRDP TLGERVGAVV ADGYEE
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