Gene Caci_3295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3295 
Symbol 
ID8334648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3635237 
End bp3636697 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content68% 
IMG OID644956440 
Productamino acid permease-associated region 
Protein accessionYP_003114043 
Protein GI256392479 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTAG TCTCACCGCC GCCGGTTCGG GTGCGGGCGG ATCAGCAGCG CCTGCGGGGC 
GGGGCGTTGG GGTTGCTGGA CATCGCCGGG TCGACGATGG CCAATATCGG GCCGGCGATG
AGCTTCTACT TCAGCTTCGG GTTTCTCGCC ACGGCGTCCG GGCTGGCTTC GCCGCTGACG
ATCGTCGCGG CCGGGGTCGC GGTGGCTTTG CTGGGGAACA CGCTGGCGCA GTTCTCGCGG
GCGCATCCTT CCGCCGGCAG CTTCGTCACG TTCGTCGGGA CGACGTTCGG CGGCGCGAGC
GCGGTGGCGA CGGCGCTGCT GGCGGCGCTC GGCTACATCA TCGGGATCTC CGCGGTGATC
GCGGTGTCCG GCGGGTTCCT GGCCACGACG CTGGAGTACT ACGCGGGGTG GAGTCCGGCG
TGGGTGGTGT GGACGCTGGT GCTGACGGCA GCGTCGGCGG CGCTGATCGT GCGGGGGATC
GTGCTCTCGA CGAAGGTCGC AGGGTTCTTC TTCGCGGTGG AGCTGGTGAT GCTGCTGGTG
GTGTCGGTCG CGGCGATCGT CAAGCACGGC GGTCATCTGT CGGCGGCGCC GTTCCTGCCG
AGCCATATCC GGGGTGGGAT GTCAGGGCTC GCCGAGGGGT TCCCGTTAGC GGTGTATCTG
TTCATCGGGT GGGAGAACTC GGCGGCGTTG GCGGAGGAGA GCGAGAATCC GCGGCGCGAT
GTGGGGCGCG CGGTGTTCTC CTCCATCGCG GTGATGTCGC TGAGCTATGT GCTGTTCGCC
TATGCCACCG TCACAGGGTT CGGATACGAC GTGCACAAGG TCGGCGCGGC GGATGTGCCG
TTCATGGTGG TCGCGCGCGG AACGTTGGGC GTCCTGGCGT TCCTGGCCTA CATCGCCGGG
CTCACCTCGA CGGTCGGCTC GTTGATCGCC GGCGCGAACT CGCAGACCCG GCTGCTGTTC
AACGCCGGTC GCGAGCGGCT GCTGCCGGCT TTTCTGGGCT ACGTGCATCC GACGCGGCGG
ACGCCGACGA ACGCCATCCT CACGTTCATC GCCGCGGCGC TGGTCATCAT CGGCGGATGG
GGTCTGGGAC ACCTCGTGGG TCATCACGGC CGGATGGACG CGACCGCCTT CTTCGCCGAG
GCGTCCTCGA TGGGTTCGAT CCTGATTCTG CTGGTGTATC TCGCCGCGAA CATCGCGCTG
CCGTTCTACT ACCGCAGATA CCGGCCGACC GAGTTCCGGG CTGTCCGGCA TGTGGTACTG
CCGCTGCTCG GCGCGGTGGC GATCGTGGTG CCGCTTTACT ACTTGGTGAA ACCAGGGCAG
CCTGCGCCGT ATAGCTGGTT CCCGTATGTC TCGCTTGCCC TGCTGGTCGC GTCCGTCGCC
TACGCGTTGG TCCTGACGCG GCGCGATCCG ACGCTGGGCG AGCGGGTCGG AGCGGTCGTC
GCCGACGGTT ATGAGGAATG A
 
Protein sequence
MSVVSPPPVR VRADQQRLRG GALGLLDIAG STMANIGPAM SFYFSFGFLA TASGLASPLT 
IVAAGVAVAL LGNTLAQFSR AHPSAGSFVT FVGTTFGGAS AVATALLAAL GYIIGISAVI
AVSGGFLATT LEYYAGWSPA WVVWTLVLTA ASAALIVRGI VLSTKVAGFF FAVELVMLLV
VSVAAIVKHG GHLSAAPFLP SHIRGGMSGL AEGFPLAVYL FIGWENSAAL AEESENPRRD
VGRAVFSSIA VMSLSYVLFA YATVTGFGYD VHKVGAADVP FMVVARGTLG VLAFLAYIAG
LTSTVGSLIA GANSQTRLLF NAGRERLLPA FLGYVHPTRR TPTNAILTFI AAALVIIGGW
GLGHLVGHHG RMDATAFFAE ASSMGSILIL LVYLAANIAL PFYYRRYRPT EFRAVRHVVL
PLLGAVAIVV PLYYLVKPGQ PAPYSWFPYV SLALLVASVA YALVLTRRDP TLGERVGAVV
ADGYEE