Gene Caci_3286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3286 
Symbol 
ID8334639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3623673 
End bp3624251 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content71% 
IMG OID644956431 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003114034 
Protein GI256392470 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCACCG AGCAGGAACC CGCCCGCAGC AAGCGCTCCG ACGCGCTCCG CAACCAGCAG 
ACGCTGCTCG CCGCCGCCGC CGAGGTGTTC GTGACCTCGG GGGTCGACGC GCCGATCCGG
CAGATCGCGG CCAAGGCCGG CGTGGGCGTC GGCACGTTCT ACCGCCACTT CCCCACCCGC
GCCGACCTGA TCACCGCCGT CTACCGGCAC CAGATCGAGG AGTGCGCCGA GGCCGGTCCG
ACACTGCTGG CGAGCGCCGA CTCGCCGTTC GAGGCGCTGC GCCGGTGGAT CGACATGTTC
ACCGACTTCC TGGTCACCAA GCACGGCCTG GCCGACGCCC TGCGCTCGGA CGACGCCACA
TTCGCCGCGC TGCACACGTA CTTTCTCGAC CGGCTGGAAC CCGTGTGCGC GAACCTGATC
GAGGCCGCCG TCGCCGCCGG CGACATCCGC GGCGACATCA GCGCCTACGA GCTGATGCGC
GGGGTCGGGA ACCTGTGTGT CGGACGGGAC CTGGACGCGC GGTACGAACC ACGGCGACTG
ATCGCGGTGC TGCTGGACGG GCTGCACGCA CCCCGCTGA
 
Protein sequence
MPTEQEPARS KRSDALRNQQ TLLAAAAEVF VTSGVDAPIR QIAAKAGVGV GTFYRHFPTR 
ADLITAVYRH QIEECAEAGP TLLASADSPF EALRRWIDMF TDFLVTKHGL ADALRSDDAT
FAALHTYFLD RLEPVCANLI EAAVAAGDIR GDISAYELMR GVGNLCVGRD LDARYEPRRL
IAVLLDGLHA PR