| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3215 |
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| Symbol | |
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| ID | 8334568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3545050 |
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| End bp | 3545943 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644956360 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003113963 |
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| Protein GI | 256392399 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000943749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.164219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACTGC GTCATCTCAG GTACTTCGTC GCTGTCGCGG AAGAGGGCGC TATGGCGCGG
GCCGCGGAAC GGCTGCATCT CACTCAACCG TCTTTGAGCC GGCAGCTTCG GCAGCTGGAG
CGGGATCTCG GGACGTCGTT GTTCGAGCGC ACTTCGCGTG GCACGTCGTT GACGGCGGCG
GGGACGGCTT TGCATCGTCA CGCGTTGCTG CTGCTCCGGC TGGCTGATGC GACGCGCGAT
GTGGTGCGGG CTGGCGACTC TGTGGTCCGC GACATCGTGA GCTTGGGGAT TCCGCAGGGT
GTGCCGGCAC AGCAGCTGAT GCGGGCCCTC GCGGAGGTGG AGGAGCGTCT GCCGCACATC
GCGATCAGCA TTACCGAGGC GAGTAGTGCC GAGCAGTTGA AGCTGATTCG GGATGGGCAT
CTGGATCTGG GGATCGTGCG GGAGCCGCCG AGTGGTGGGC TGCGTGCGGC GCTACTTTTC
GAGGTGCCGA TGGGGTTGGC GGTGCGGCCC GGGCACGCGC TCGCCGCGAA GGCGTTCTGC
CGGCTGAGCG ATTGGGACGG GCTGCGGATT CTCGCCCATG GGCGGCAGCA GGTTCCGGTC
GTGCACGATC GGTTGGTGGT CGTCGCGCAC GATGCGGGGG TGGTGCCGCT TTGGCACTTC
GCGCAGTTCT CGGAGAACGC GCTGGTGTGC GCGCAGGCGG CGAAGGCTGA GGCGGTGCTG
CTGATCGAGC ATTCGGCGCG GCGGCTTCTG CCGGACTGGC CGTGGCTGCC ATTGGCCGAG
CCGGATTTGG CGCTGACGAC ATGGCTGGCG TGGCCCGCGG AGAGTCGCGC TGCGGTTGCC
GACGTCGCCG GGGTCGTTGC TGCTTCGTTG AGACGCGGCG CCGAGGCTGC CTGA
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| Protein sequence | MELRHLRYFV AVAEEGAMAR AAERLHLTQP SLSRQLRQLE RDLGTSLFER TSRGTSLTAA
GTALHRHALL LLRLADATRD VVRAGDSVVR DIVSLGIPQG VPAQQLMRAL AEVEERLPHI
AISITEASSA EQLKLIRDGH LDLGIVREPP SGGLRAALLF EVPMGLAVRP GHALAAKAFC
RLSDWDGLRI LAHGRQQVPV VHDRLVVVAH DAGVVPLWHF AQFSENALVC AQAAKAEAVL
LIEHSARRLL PDWPWLPLAE PDLALTTWLA WPAESRAAVA DVAGVVAASL RRGAEAA
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