Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3211 |
Symbol | |
ID | 8334564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3539115 |
End bp | 3539864 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644956356 |
Product | putative integral membrane protein |
Protein accession | YP_003113959 |
Protein GI | 256392395 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0356506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0103033 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAATG TGGTCAGTGG TCTGATCGTC GTGGCCGTCG CAGGCCTGAT CGGTGCGGTG GGCCTGTTCG TGCGGCTCCG CGTGTTCCCG GGGAAGGAGG ACGAGGAGCG CGAGGACGTC GCCGGCTACG TGACCATGAT GGTCGGCGTC ATGTTCGCCC TGGTCCTCGC CCTGGCGCTG GTCTCGGTGT GGGAGGACAA GGACAGTGCC GAGGGGCACG TCGCCTCCGA GGCGAGCAGC CTGAACGAGA CCTACCTGCT CGGCGCCTCG ATGCTGCCCG CCGACCAGGA GAAGATCCAG GCGGCGGCTT CGGCCTACGC CGGTTACGTC GTCCACACTG AGTTTCCGAA GATGCGGTCG GGCAAGGAGG TCGACGACAC CGGCTGGCAG CTCCTGACCA ACGTGCGCAC ATCGTTCCTG AACGCCAACG TCTCCACGCC CGCGCGCCAA GCCGTCCTGT CGGACGCGAC GACGCAAATC AGCAACCTGG CAGACGCCCG GCGCGGACGC CTGGAGGACG CCGACAAACG CATGCCGTCG GTGCTGTGGA TCGGGCTCAT CCTCGGCGGT GTGCTCACCG TCGCGATGAC GTTCATCTAC GGGATCGAGC AACGCTTCAC GCACGTCGGC ATGGTGATGG GAATGGCGGC GATGATCGGA TTCGTCCTGA TCCTGATCTA CAACCTCGAC AATCCCTTCA ACTCCGGCAC GGGAGCCGAT TCGGCGCCGT TCACCAGCTA CTTCCCCTAA
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Protein sequence | MSNVVSGLIV VAVAGLIGAV GLFVRLRVFP GKEDEEREDV AGYVTMMVGV MFALVLALAL VSVWEDKDSA EGHVASEASS LNETYLLGAS MLPADQEKIQ AAASAYAGYV VHTEFPKMRS GKEVDDTGWQ LLTNVRTSFL NANVSTPARQ AVLSDATTQI SNLADARRGR LEDADKRMPS VLWIGLILGG VLTVAMTFIY GIEQRFTHVG MVMGMAAMIG FVLILIYNLD NPFNSGTGAD SAPFTSYFP
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