Gene Caci_3211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3211 
Symbol 
ID8334564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3539115 
End bp3539864 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content65% 
IMG OID644956356 
Productputative integral membrane protein 
Protein accessionYP_003113959 
Protein GI256392395 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0356506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0103033 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAATG TGGTCAGTGG TCTGATCGTC GTGGCCGTCG CAGGCCTGAT CGGTGCGGTG 
GGCCTGTTCG TGCGGCTCCG CGTGTTCCCG GGGAAGGAGG ACGAGGAGCG CGAGGACGTC
GCCGGCTACG TGACCATGAT GGTCGGCGTC ATGTTCGCCC TGGTCCTCGC CCTGGCGCTG
GTCTCGGTGT GGGAGGACAA GGACAGTGCC GAGGGGCACG TCGCCTCCGA GGCGAGCAGC
CTGAACGAGA CCTACCTGCT CGGCGCCTCG ATGCTGCCCG CCGACCAGGA GAAGATCCAG
GCGGCGGCTT CGGCCTACGC CGGTTACGTC GTCCACACTG AGTTTCCGAA GATGCGGTCG
GGCAAGGAGG TCGACGACAC CGGCTGGCAG CTCCTGACCA ACGTGCGCAC ATCGTTCCTG
AACGCCAACG TCTCCACGCC CGCGCGCCAA GCCGTCCTGT CGGACGCGAC GACGCAAATC
AGCAACCTGG CAGACGCCCG GCGCGGACGC CTGGAGGACG CCGACAAACG CATGCCGTCG
GTGCTGTGGA TCGGGCTCAT CCTCGGCGGT GTGCTCACCG TCGCGATGAC GTTCATCTAC
GGGATCGAGC AACGCTTCAC GCACGTCGGC ATGGTGATGG GAATGGCGGC GATGATCGGA
TTCGTCCTGA TCCTGATCTA CAACCTCGAC AATCCCTTCA ACTCCGGCAC GGGAGCCGAT
TCGGCGCCGT TCACCAGCTA CTTCCCCTAA
 
Protein sequence
MSNVVSGLIV VAVAGLIGAV GLFVRLRVFP GKEDEEREDV AGYVTMMVGV MFALVLALAL 
VSVWEDKDSA EGHVASEASS LNETYLLGAS MLPADQEKIQ AAASAYAGYV VHTEFPKMRS
GKEVDDTGWQ LLTNVRTSFL NANVSTPARQ AVLSDATTQI SNLADARRGR LEDADKRMPS
VLWIGLILGG VLTVAMTFIY GIEQRFTHVG MVMGMAAMIG FVLILIYNLD NPFNSGTGAD
SAPFTSYFP