Gene Caci_3207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3207 
Symbol 
ID8334560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3535846 
End bp3536619 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content69% 
IMG OID644956352 
Productprotein of unknown function DUF1503 
Protein accessionYP_003113955 
Protein GI256392391 
COG category 
COG ID 
TIGRFAM ID[TIGR03083] uncharacterized Actinobacterial protein TIGR03083 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0703058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0564696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGAGA ATCTGGAGTT CCCCGAGCTG CTGCGGCTCC TCGGCGAGCA GGCGGCGACC 
CTGCGCGCCA CGATCGCGTC CGCGCCCGCG CTGGACGTGA AGGTGCCGAC GTGTCCTGAG
TGGACGCTGC TGGATCTGGT GCGGCACATG GCCGAGGTGC AGAGTTTCTG GGCCGCCGTC
GCCGATGCCG GTCCGGCGGA CACTCCCCCG GGATCCCCGT CGGATTTCGT GGACGCCGCG
CCGGATGAGC GCGAAGCTTT GCTGGCATGG TCCGCTGCGG CGACACAGCG GCTGCGGGAC
TCGTTGCGCG CCGCCGGTCC GGACGCCGCG TGTTGGACGT GGTGGGACAC CTCGGATTCG
CCGCAGACCG CCGGCGTCGT CGCCCGGCAC CAGCTGCTCG AGATGAGCGT GCACACCTAC
GACGCCCAGA ACGCCGTCGG CGCCCCGCTG CCCCTGCCGA CCGATGTGGC ACTCGACAGC
ATCCCGCACT TCCTGTCGAC CTGCTGCGCG AACTCGACGC CTTGGCCGCA CGAGCCCGCA
GCGTTGGAGT TTCAGGCCTC TGAGGGTCGA TCCTGGCGCC TCACGCTCTC AGCCGATGGC
GCGCATCACA CGCGCGTTCC GGCTTCCGCC ACGATGACGG CGGGCACCAC AGCTGTTCGT
GGCACCGCGT CGGAGTTGGT CATGGTTCTG TATAGCCGGC TTCAGATCAC GGATCTGACC
GTCGACGGCG ACCCGCACCT CTTCGAGCTG TTGCGGGACT GGGAGCCGGA TTAG
 
Protein sequence
MPENLEFPEL LRLLGEQAAT LRATIASAPA LDVKVPTCPE WTLLDLVRHM AEVQSFWAAV 
ADAGPADTPP GSPSDFVDAA PDEREALLAW SAAATQRLRD SLRAAGPDAA CWTWWDTSDS
PQTAGVVARH QLLEMSVHTY DAQNAVGAPL PLPTDVALDS IPHFLSTCCA NSTPWPHEPA
ALEFQASEGR SWRLTLSADG AHHTRVPASA TMTAGTTAVR GTASELVMVL YSRLQITDLT
VDGDPHLFEL LRDWEPD