Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3195 |
Symbol | |
ID | 8334548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3523170 |
End bp | 3524099 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644956340 |
Product | periplasmic solute binding protein |
Protein accession | YP_003113943 |
Protein GI | 256392379 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0732077 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGGTG GGATCGCGGC GCTCGCGGTG GGGGCGGCGC TGACCGCGGG CTGTTCGACC AAGCCGGCGA CCGCTCCGGT CGGGGCGAGC GCCCCGGGCG GAGCGACCAC GAAGATCGCA GTCGTCGCCG CGGAGAACTT CTGGGGCTCG ATCGCCTTGC AACTCGGCGG GACGCACGTC ACCGCGGCGT CGATCATCTC CAACCCGGAC ACCGACCCGC ACTCCTACGA GGCGACCCCC AACGACGCCA AGCTCATCGC CCGCGCGCGG CTGTTCATCC AGAACGGCAT CGGCTACGAC ACCTCCTGGG CGCCCAAACT GGTCTCCGCC AACCCCGCCT CCGGCCGCGA CGTCCTGACC GTCGGCGACG TCGTCGGCCT CAAGGACGGC GACAACCCGC ACCAGTGGTA CTCCCACGAC AGCGTCGACA AGGTCATCGA CGCGATCACC GCCGAGTACA AGAAACTCGA CCCCGCCGAC GCCGCCTACT TCGACACCCA GAAGCAGACC TTCGAGACCA CCACGCTGGC GCCCTACAAC CAGCTGGAGT CCGACATCAA GGCGACGTAC GCCGGGACCC CCATCGGCGC CTCCGAATCG ATCGTCTCCC CGCTGGCCGA CACCCTCGGG CTGAAGATGG CGACGCCGTA CTCCTTCCTG AAGGACATCT CCGAGGGCAA CGATCCCTCG GTCGCTGACA AGACCGCGAT CGACAGCCAG ATCAAGGGCA AGCAGATCAA GGTCTACGTC TACAACTCCC AGAACTCCAC TCCTGACATC GCCGCGCAGG TCGCCGAGGC CAAGGCCGCC GGCATCCCGG TGACGACCGT GACCGAGACG CTGGCACCGG CAGGAGCCAC CTTCCAGGAC TGGATGGTCG CCGAGCTTCA AGGGCTGAAG TCGGCGCTGG CACAGGCGAC AGGGCACTGA
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Protein sequence | MAGGIAALAV GAALTAGCST KPATAPVGAS APGGATTKIA VVAAENFWGS IALQLGGTHV TAASIISNPD TDPHSYEATP NDAKLIARAR LFIQNGIGYD TSWAPKLVSA NPASGRDVLT VGDVVGLKDG DNPHQWYSHD SVDKVIDAIT AEYKKLDPAD AAYFDTQKQT FETTTLAPYN QLESDIKATY AGTPIGASES IVSPLADTLG LKMATPYSFL KDISEGNDPS VADKTAIDSQ IKGKQIKVYV YNSQNSTPDI AAQVAEAKAA GIPVTTVTET LAPAGATFQD WMVAELQGLK SALAQATGH
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