Gene Caci_3195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3195 
Symbol 
ID8334548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3523170 
End bp3524099 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content68% 
IMG OID644956340 
Productperiplasmic solute binding protein 
Protein accessionYP_003113943 
Protein GI256392379 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0732077 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGTG GGATCGCGGC GCTCGCGGTG GGGGCGGCGC TGACCGCGGG CTGTTCGACC 
AAGCCGGCGA CCGCTCCGGT CGGGGCGAGC GCCCCGGGCG GAGCGACCAC GAAGATCGCA
GTCGTCGCCG CGGAGAACTT CTGGGGCTCG ATCGCCTTGC AACTCGGCGG GACGCACGTC
ACCGCGGCGT CGATCATCTC CAACCCGGAC ACCGACCCGC ACTCCTACGA GGCGACCCCC
AACGACGCCA AGCTCATCGC CCGCGCGCGG CTGTTCATCC AGAACGGCAT CGGCTACGAC
ACCTCCTGGG CGCCCAAACT GGTCTCCGCC AACCCCGCCT CCGGCCGCGA CGTCCTGACC
GTCGGCGACG TCGTCGGCCT CAAGGACGGC GACAACCCGC ACCAGTGGTA CTCCCACGAC
AGCGTCGACA AGGTCATCGA CGCGATCACC GCCGAGTACA AGAAACTCGA CCCCGCCGAC
GCCGCCTACT TCGACACCCA GAAGCAGACC TTCGAGACCA CCACGCTGGC GCCCTACAAC
CAGCTGGAGT CCGACATCAA GGCGACGTAC GCCGGGACCC CCATCGGCGC CTCCGAATCG
ATCGTCTCCC CGCTGGCCGA CACCCTCGGG CTGAAGATGG CGACGCCGTA CTCCTTCCTG
AAGGACATCT CCGAGGGCAA CGATCCCTCG GTCGCTGACA AGACCGCGAT CGACAGCCAG
ATCAAGGGCA AGCAGATCAA GGTCTACGTC TACAACTCCC AGAACTCCAC TCCTGACATC
GCCGCGCAGG TCGCCGAGGC CAAGGCCGCC GGCATCCCGG TGACGACCGT GACCGAGACG
CTGGCACCGG CAGGAGCCAC CTTCCAGGAC TGGATGGTCG CCGAGCTTCA AGGGCTGAAG
TCGGCGCTGG CACAGGCGAC AGGGCACTGA
 
Protein sequence
MAGGIAALAV GAALTAGCST KPATAPVGAS APGGATTKIA VVAAENFWGS IALQLGGTHV 
TAASIISNPD TDPHSYEATP NDAKLIARAR LFIQNGIGYD TSWAPKLVSA NPASGRDVLT
VGDVVGLKDG DNPHQWYSHD SVDKVIDAIT AEYKKLDPAD AAYFDTQKQT FETTTLAPYN
QLESDIKATY AGTPIGASES IVSPLADTLG LKMATPYSFL KDISEGNDPS VADKTAIDSQ
IKGKQIKVYV YNSQNSTPDI AAQVAEAKAA GIPVTTVTET LAPAGATFQD WMVAELQGLK
SALAQATGH