| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3177 |
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| Symbol | |
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| ID | 8334530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3506736 |
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| End bp | 3508295 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644956323 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003113926 |
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| Protein GI | 256392362 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.706315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000232213 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCTGCCGA AAACCGGCCA GCCCGTCGAA AGCGAGAAGA AGCGCATGTC AACCACCACA
GAAAGCTTGC AGCCGGCCGG TACCGGCGCG GGCGCCGAGA CCGGGACCCC GGCGCTGAAC
CCGCGCCGCT GGGCCGCCCT GGTCCTGATC GCCGTCGCCC AGCTGATGAT CGTGCTCGAC
GGCACGATCG TGAACATCGC GCTGCCGACG ATGCAGCGCA ACCTGCACAT ATCCGATGTG
AACAAGCAGT GGGTCATCAC CGCCTACGCG CTGGCCTTCG GCTCGATGCT GCTGCTCGGC
GGCCGCGTGG CCGACTACAC CGGCCGCAAG CGGGCCTTCG TCATCGGCCT GCTCGGCTTC
GCCGCGGCCT CCGCCCTGGG CGGCGCCGCG ACCAACGAGG CGATGCTCTT CGGCGCCCGC
GCCGTGCAGG GCGTGTTCGG CGCGCTGATG GCGCCGGCCG CGCTGTCGCT GCTGACCGTC
ACCTTCACCG AGGAGAAGGA GCGCGCCCGG GCGTTCGGCG TCTACGGCGC CATCGCCGGC
GGCGGCACCG CCATCGGTCT GATCATGGGC GGTGTGCTCA CCGAGTACGC CTCCTGGCGC
TGGACGCTGC TGGTGAACGT GCCGATCGCG GTCGTCGCCG CCTTCTTCGC CTCCCGCGTG
CTGACCGAGA GCAAGGCCGC CGGCAACACC AAGTACGACA TCCCCGGCGC CCTGACCTCC
ACCGCCGGAC TGGCCGCGCT GGTCTACGGC TTCAACAAGG CCAACACCGA CGGCTGGGGC
TCGGCGACCA CCCTGAGCCT GCTCGCCGCG GGCCTGGCGC TGCTGGTCGC GTTCCTGGTC
ATCGAGCTGC GCACCTCGCA CCCGCTGCTG CCGATGCGCG TCATCCTGGA CCGCAACCGG
GGCGGCTCGT TCCTCAGCTC CCTGCTGATG GGCGTGGGCA TGTTCGGGGT CTTCATCTTC
CTGACCTACT ACCTGCAGCA GATCCTGGGC TACTCGGCGC TGAAGTCGGG CTTCGCCTTC
CTGCCCTTCA CCTTCGGCGT GATCGCCGGC GCCGGCGTGG CCACCCGCTT CCTGCCGCGC
ATCGGCCCGC GCGTCCTGAT GGCCGTCGGC TTCGGCCTGG CGACGCTCGG CATGGTGCTG
TTCACCGGCA TCGGGGTGGA CACCTCCTAC CTCACCCACG TCGTCCCGGC CGAGCTGGTG
ATGTCCTTCG GCATCGGGCT GTTCTTCGTC CCGCTGTCCT CGACCTCGCT GATCGGCGTC
GCCGACCACG ACGCCGGCGT GGCCTCGGCG CTGGTGAACA CCACGCAGCA GATCGGCGGC
GCCCTGGGCA CCGCGATGCT GGTGACGTTC GCGACCACCG CCACGACGAA CTACCTCGGC
TCCCACGCCG CCCACGCCAC GAACCAGTCC CTGCTCATCG CGCAGGCCTC GGTCCACGGC
TACGTGACCG CCTTCATCTG GAGCGCCGCC ATCCTCGGCG CCGCCACGCT GGTGGTCGCC
ACCCTGGTCA AGGCCCGCAA GGACGACCTG CCCACCGGCG GCGCCGTCCA CATGGGCTGA
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| Protein sequence | MLPKTGQPVE SEKKRMSTTT ESLQPAGTGA GAETGTPALN PRRWAALVLI AVAQLMIVLD
GTIVNIALPT MQRNLHISDV NKQWVITAYA LAFGSMLLLG GRVADYTGRK RAFVIGLLGF
AAASALGGAA TNEAMLFGAR AVQGVFGALM APAALSLLTV TFTEEKERAR AFGVYGAIAG
GGTAIGLIMG GVLTEYASWR WTLLVNVPIA VVAAFFASRV LTESKAAGNT KYDIPGALTS
TAGLAALVYG FNKANTDGWG SATTLSLLAA GLALLVAFLV IELRTSHPLL PMRVILDRNR
GGSFLSSLLM GVGMFGVFIF LTYYLQQILG YSALKSGFAF LPFTFGVIAG AGVATRFLPR
IGPRVLMAVG FGLATLGMVL FTGIGVDTSY LTHVVPAELV MSFGIGLFFV PLSSTSLIGV
ADHDAGVASA LVNTTQQIGG ALGTAMLVTF ATTATTNYLG SHAAHATNQS LLIAQASVHG
YVTAFIWSAA ILGAATLVVA TLVKARKDDL PTGGAVHMG
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