Gene Caci_3158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3158 
Symbol 
ID8334511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3473093 
End bp3473665 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content70% 
IMG OID644956305 
Productbifunctional deaminase-reductase domain protein 
Protein accessionYP_003113908 
Protein GI256392344 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0253763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.175179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAGA TCATCGTCAG CACCAACGCC TCGCTCGACG GCGTCGTGCA GGACCCGGAC 
GGCAAGGAGG GCTTCGCCCT CGGCGGCTGG TTCGACCAGG TCGTGGGACA GGACCGGGCG
CCGTGGGCGG CGGCGTTCGC CGCGGAGGCG CTGGCCGGCG AGGCGTTGCT GCTGGGGCGC
ACGACCGACG AGTGGTTCGC CTCGCGCTGG CTGGGGCGGG ACGGCGCGTG GGCGGAGAAG
CTGAACGCGA TGCCGAAGTA CGTCGTCTCC GGCAGCTTGG AGAGCGCCGC CTGGTCCAAC
GCGACGGTCG TCAGCGCCGA CCTGCCCGCC GAGGTCGCCC GGATCAAGCA GGAGATCGAC
GGCGAGGTGC TGGTGTACGC GAGCTTCCAG CTCGTCCACG CGCTGATCGA GCAGGACCTC
GTCGACGAGA TCCGGCTCAT GGTGATCCCG GTCGTGGTCG GCGAGGGAGC GCGCCTGTTC
GGGACGGCCG GCGGCGTGAA GCCGCTGCGG CTCATCAGCA CCCGGAGCGT CGGCGAGAAC
ATCGTGTTCG TCGATTACGA GGTGGTGAAG TAA
 
Protein sequence
MGKIIVSTNA SLDGVVQDPD GKEGFALGGW FDQVVGQDRA PWAAAFAAEA LAGEALLLGR 
TTDEWFASRW LGRDGAWAEK LNAMPKYVVS GSLESAAWSN ATVVSADLPA EVARIKQEID
GEVLVYASFQ LVHALIEQDL VDEIRLMVIP VVVGEGARLF GTAGGVKPLR LISTRSVGEN
IVFVDYEVVK