Gene Caci_3150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3150 
Symbol 
ID8334503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3461615 
End bp3463081 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content74% 
IMG OID644956297 
Productprotein of unknown function DUF690 
Protein accessionYP_003113900 
Protein GI256392336 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.565533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGACTG AGCGGGACCA GATCCAGGCG TACCAGTTCC TCCGACGGCG GTTGGTGTCC 
GCGCTGGTCA CCTCCGACCC CAACCACCCG ACCTCGCCGC ACCGGCGGCT GGTGATGGGC
ACGGTCCTGG GCACGGTGGC CACCATGCTC ACGGCCGCCG GCTTCGGCAT CTCCGGCATG
ATGGCGCCCA GCCCGCCCCC GGACTGGCAG CACACCGGGC TGGTGATCCT GGACTCCGAC
GGCGGCGGCC GCTACGTCCT GGACAACACC GGCGTCCTGC ACCCGGTGAC GAACCTGGCC
TCGGCCCGCC TGCTCGCCAA CGGCGTCAAG ACCGTCTCGG TGACCACCAA ACTGCTCGGC
GGCACCCCCC GCGGCGCCAC CCTCGGCATC GCCAACGCCC CCGACATGCT CCCGGACCCC
GCCGGCGTGA TCACCGCCCC CGCCCCGGTC GCCTGCTCCC GCGCCACCTC CGACATCCCG
AAGCAGACCG GCCCGGCCGG CGCCCTCCTG CTGGCGCACA CCGGCGACGC CACCGCGAGC
CTGGACGGCA TGGTCTCCCT GCCCGAAGGC AGAGCCCTGG TGGTCCAGAC CCCGAAGGGC
GACCGCTACC TGATCACCGA CGGTCTGAAG TACAAGCTCG CCGACAACAA CGTGATGACC
GCGCTGGGCT ACCAGGCCTC CGCGACCTTG CCCGTCGCAG CGAGCTGGCT CACCACCCTG
CCCTCCGGCC GCGACCTGGC CCTGACGGCC GTCCCCGGCG CCGGCGGCCC GGGCCCGCGC
GTCGGCGCCG TGAAGCGCAA GGTCGGCGAG GTCCTCACGG TCGACAACGC GGTGGCCGGC
AAGACCCTGT ATTACCTCGT CCTGTCCGGC GGCCTCGAAC CGATCCCGCA GATCCAGGCG
GCGCTGATCG TCGCGGACGG CGCCAACGCC GCCGCGTACA CCGACGGCCC GCAGCAGCCC
CGCCCGGTCT CGGTCTCCGA CGCCACCGCC GCTCCCTCGG CTCCGGCGGG CGAGGACACC
AAGGGCTACC CGGCCGGCGT CCCGGGTCCG GTCACCGGCC TCGGCGCCAG CACGGTGGTC
TGCGCGACCG GCGACGGCGC GGCGCCGGCG CAGATCGCGG TGGGTGTCGC CGTCCCGCTG
CCGCAGGGCG CGCGCACCGT GCCGACGGGA GCGCCGCAGG GCGGCACGGT CGCGGACGAG
GTCTACCTGC CGCCGGGCAC CGCCGCCCTC GCCACGATCC ACACGGAACC GACCACGCAG
AACAACGGCA GCCAGCAGAA CGCGCCGGTC TACCTGATCA CCGATGCGGG GACGAAGTAC
CCGCTCACCG ACGGCACGGC CCGCTCGGCG CTCGGCTACG GCAACGCCGC CCCCGCGGTA
CTGCCGACGA CCGCGCTGGC GATGCTGCCG ACCGGGCCCG CGCTCGACGA GGCGGACGCG
CAGAAGCCGG TGGTGGTCGG GAACTGA
 
Protein sequence
MWTERDQIQA YQFLRRRLVS ALVTSDPNHP TSPHRRLVMG TVLGTVATML TAAGFGISGM 
MAPSPPPDWQ HTGLVILDSD GGGRYVLDNT GVLHPVTNLA SARLLANGVK TVSVTTKLLG
GTPRGATLGI ANAPDMLPDP AGVITAPAPV ACSRATSDIP KQTGPAGALL LAHTGDATAS
LDGMVSLPEG RALVVQTPKG DRYLITDGLK YKLADNNVMT ALGYQASATL PVAASWLTTL
PSGRDLALTA VPGAGGPGPR VGAVKRKVGE VLTVDNAVAG KTLYYLVLSG GLEPIPQIQA
ALIVADGANA AAYTDGPQQP RPVSVSDATA APSAPAGEDT KGYPAGVPGP VTGLGASTVV
CATGDGAAPA QIAVGVAVPL PQGARTVPTG APQGGTVADE VYLPPGTAAL ATIHTEPTTQ
NNGSQQNAPV YLITDAGTKY PLTDGTARSA LGYGNAAPAV LPTTALAMLP TGPALDEADA
QKPVVVGN