| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3134 |
|---|
| Symbol | |
|---|
| ID | 8334487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 3442098 |
|---|
| End bp | 3442601 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644956281 |
|---|
| Product | protein tyrosine phosphatase |
|---|
| Protein accession | YP_003113884 |
|---|
| Protein GI | 256392320 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0394] Protein-tyrosine-phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACG CCACCGCCCG CGGCCCGTAC CGCGTGACCT TCGTCTGCAC CGGCAACATC
TGCCGCTCCC CCATGGCCGA GCACGTGCTG CGCAAGTACG TCGAGGACGA GGGCCTGGAC
GCGATCGTGG ACAGCTCCGG GACCGGCGGC TGGCACGTCG GGGACACGGC CGACCACCGC
ACCGTCCGCG CCCTCCGGCG CCACGGCTTC ACCTCCGACC ACGCCGCCCG CAAGTTCCAG
CGCGGCTGGT TCGACGACTA CGACCTCGTC ATCGCCCTGG ACGCCGGACA CCTGCGCGAG
CTGCGGGCCC TGGCCCGCAC CGACCAGGAC CGGGACAAAA TCAGGCTGCT GCGGTCCTTC
GATCCCTCGG CGGGCCCCGA CCTGGACGTG CCGGACCCGT ACTACGACGA CGACGAAGCC
TTCGAGCACG TCATGGACCT GATCGAGCGC GCGGCGCCGG GCATCGTGGA GGAGATCCGG
CGCGGGCTGA AGAGCGCCGG CTGA
|
|---|
| Protein sequence | MSDATARGPY RVTFVCTGNI CRSPMAEHVL RKYVEDEGLD AIVDSSGTGG WHVGDTADHR
TVRALRRHGF TSDHAARKFQ RGWFDDYDLV IALDAGHLRE LRALARTDQD RDKIRLLRSF
DPSAGPDLDV PDPYYDDDEA FEHVMDLIER AAPGIVEEIR RGLKSAG
|
|---|
| |