Gene Caci_3128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3128 
Symbol 
ID8334481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3437314 
End bp3437853 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content72% 
IMG OID644956275 
ProductFHA domain containing protein 
Protein accessionYP_003113878 
Protein GI256392314 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTCT GCACCAGGTG CGGGAACGCC AACCAAGCGG GGAGCCGCTT CTGCTCGCAC 
TGCGGCACCG CATTGGCCGA GTCCCCGCTT CCGGGTGACC CCTTGGTGCC CGAGGGAGCG
GCGGAGCGGA CCTCGACGAT GTCGCTGGTC AGTGCGGAAG CAGCCGCCGA AGCGGAGGTC
GGCGGCGAGG AGACGGAGCG GGTCGGACTG GGTCCGGCCG ACCGCGAGGC GCTGGCCGCG
CTCCCGGCCG GCTCGGCGCT GCTGGTGGTG CGGCGCGGGC CGAACGCCGG CAGCCGGTTC
CTGCTGGACG CCGACGTCAC CACCGTCGGG CGCAGCCCGG ACAGCGACAT CTTCCTGGAC
GACGTCACCG TCTCCCGCCG CCACGCCGAG TTCGCGCGCA GCGCGCAGGG TTTCCTGGTG
CGCGACGTCG GGAGCCTGAA CGGCACCTAC GTCGACCGCA ACCTGATCCA GGAGGCGCTG
CTGCGCGACG GCGACGAGGT GCAGGTCGGC AAGTACCGCC TGGTGTTCCA CAAGGGCTGA
 
Protein sequence
MPFCTRCGNA NQAGSRFCSH CGTALAESPL PGDPLVPEGA AERTSTMSLV SAEAAAEAEV 
GGEETERVGL GPADREALAA LPAGSALLVV RRGPNAGSRF LLDADVTTVG RSPDSDIFLD
DVTVSRRHAE FARSAQGFLV RDVGSLNGTY VDRNLIQEAL LRDGDEVQVG KYRLVFHKG