Gene Caci_3126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3126 
Symbol 
ID8334479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3434783 
End bp3436498 
Gene Length1716 bp 
Protein Length571 aa 
Translation table11 
GC content71% 
IMG OID644956273 
Productprotein of unknown function DUF881 
Protein accessionYP_003113876 
Protein GI256392312 
COG category[S] Function unknown 
COG ID[COG3879] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACGC GGCCGGGGAA CGAGCCGGAG CGGGATCCGC AGGAGCCGGA GACGGACTCG 
GAGGCGGAGA CGGGCTCGGA GGCGGAGCCG ACTTCGGAAT CAGCGGACGG TGCTGAGGAG
AGTGAGCGGG ATCCGTTCAC GCCCAAGGTG CCGCCGTCCG ACGACGACGA TGAGGCTGAG
GCTGAAGCTG AGGCGCCAGA GCCGGCTGCC GCGGACCTCA CCGAGACCGT GGACATCCGA
AGCCTTCCAG AGGAACCGGC TGCCGACGCG GACTTGGCCG CGACGATGGA CTTGCGGAGT
GTGCAGCAAG AGCCGGCAAG CAAGCCCGAT CGCTCGCACA AGCACCGCGG AGAAAAGGCT
GCGGAGTCGC TCAAGCCGCT CCCGGCCGCT GAGGAGCCCG TCGCCGCCGA GAACAACGAT
GAGCCCGCTG GCGAGCCTGA GCAGCCGGAG AAGGCGACCC CGGATGCCGC CAAGACGGTG
AATCTTCGGG ACCTGCTTCC CGAGAGTGAG ACCCCTGAGG ACAAGGCTGC CGATTCCGGC
GAAAGCGAGC CCTCGCGCGA GCAGGAGCAG GAGCAGGAGC AGGAGCAGAG CGAATCAGCT
GCTGGCGACC CTCCTTCTCG CAGCACTCCC GACGAGAGCG AGTCTTCCTC CGAGCAGGAC
CGGAGCGAAG ACAGCGAGCC GACCGCCGGC GAACCACCCC TCCGCCGCCG CACTCCCCCC
GAGCCCGGCG AGCACGATCC GGCCGTCCGT CGCCGCACCG GCGAAGGCGA GCCGCCGCGG
CGTCGTCCCG CTCCCGGCGG GCAGCCTGCG CGGCGTCCTG GGGCGGGGCA GGATCCGCGG
CGTGGCGGGT ATCCGCATCC GGGTGAGGCC GGTGGTCCTC GGCGTCGGCC GGCGCCTGGT
CCGCGGCCGG TTGGTGCGGC TGCCGCGGTG GTCGCGGCTC CGACTGCCGC TCCGGCGGCG
TCCGTGCCGG CCAAGACTCC CTCGGCGCCC TCGGTCTCGC TGGGGCGGCG GCGGTTGTTC
ACCGCGTTGT GGCCGCCGCG GTTGTCGCGG AACCAGGCGG TGGTCGGTGT GCTGCTGGGG
GTGCTCGGGG CGGCGCTGGC CATCCAGGTG CATGCGACCA ACACCTCTGA TGAGATCCTG
CGCGGGGCGC GGGCCGACGA TCTGGTGAAC ATCCTTGATG AGGTGACGTC GCGGGGTCAG
AGTCTGGATG CCGAGCTGCG GACTCTGGAG ACGCAGAACG CCACGATCCA GGACAGCACC
GACAAGGCAC AGGCGGCGTT GGCGCAGGCG CAGCAGAAGG CGAAGGATCT GCAGATCCTG
GCCGGGACGG TCAAGGCCAA GGGTCCCGGG ATCACCATGA CCATCACCGA TCCGCAGGGG
CAGCTCAAGT CGGCGACGTT GCTCAACGCG CTGGAGGAGC TTCGCGCCGC CGGTGCCGAG
GTGGTGCAGG TGGACAACGT GCGGGTGATC GTGTCCTCGT CCTTCGTCGA CGCCGCCGAC
GGCGGGATCG CGCTGGACGG GCACCCGCTG ACCCAGCCGT ACGTCTACAA GGTGATCGGC
GATCCGAACA CGATCGGGCC GGCGATGCAG ATCCCCGGCG GCGTGGTGGC GACGGTGAAG
TCCTCGCCGG GCGCCAACGC CACGATCGCG CCCGGGCAGG TGCTGGTCGA CGCCGTCGTG
CCGCCGCCGA ATCCGACTTA CGCCAAGGCT GGCTGA
 
Protein sequence
MQTRPGNEPE RDPQEPETDS EAETGSEAEP TSESADGAEE SERDPFTPKV PPSDDDDEAE 
AEAEAPEPAA ADLTETVDIR SLPEEPAADA DLAATMDLRS VQQEPASKPD RSHKHRGEKA
AESLKPLPAA EEPVAAENND EPAGEPEQPE KATPDAAKTV NLRDLLPESE TPEDKAADSG
ESEPSREQEQ EQEQEQSESA AGDPPSRSTP DESESSSEQD RSEDSEPTAG EPPLRRRTPP
EPGEHDPAVR RRTGEGEPPR RRPAPGGQPA RRPGAGQDPR RGGYPHPGEA GGPRRRPAPG
PRPVGAAAAV VAAPTAAPAA SVPAKTPSAP SVSLGRRRLF TALWPPRLSR NQAVVGVLLG
VLGAALAIQV HATNTSDEIL RGARADDLVN ILDEVTSRGQ SLDAELRTLE TQNATIQDST
DKAQAALAQA QQKAKDLQIL AGTVKAKGPG ITMTITDPQG QLKSATLLNA LEELRAAGAE
VVQVDNVRVI VSSSFVDAAD GGIALDGHPL TQPYVYKVIG DPNTIGPAMQ IPGGVVATVK
SSPGANATIA PGQVLVDAVV PPPNPTYAKA G