Gene Caci_3020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3020 
Symbol 
ID8334371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3340491 
End bp3341015 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content68% 
IMG OID644956166 
Productsingle-strand binding protein 
Protein accessionYP_003113770 
Protein GI256392206 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.666273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0842744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATCC CCGTCACCAT CGTCGGCCGC ATCGGACAGC CGCCCGAGCT GAAGTTCGGC 
TCCAGCGGCA AAGCCATCGC CCGCTTCTCC GTCGTCACCA GCCGGCGCGT TCTCGATAAG
ACCTCGAACG AGTGGTCCGA CACCGACACG ACGTGGTGGA ACTGCACTGC GTTCGGCGAC
CTCGCCGAGA ACGTGGCCGA ATCCTGCGAG AAAGGGTGCG CCGTCATCGT GACCGGCCGC
GCAGCCTCCG AGACCTGGAA CGACAAGAAC ACCGGCGAGA AGCGCACCGC CATGAAAGTT
ATCGCCGACG AGGTCGCGCC GTCGCTGCGG TTCGCCACCG CGAAGATCAC CAAGGCCAAC
CGTGGCGGCG GCGGTGGGAA CTCCGGCGGC GGACAGCCCC AAAGCCAGGG CCAGCCCTCC
GGCAACCGCA GCGGCCAGCA GCAGAACACG GGCGGTGGCG GCTGGGGTGG CGGGAACGGC
GGCGGTGGGT GGGGAGCCGG TGGCGATACC GAGCCGCCTT TTTAG
 
Protein sequence
MSIPVTIVGR IGQPPELKFG SSGKAIARFS VVTSRRVLDK TSNEWSDTDT TWWNCTAFGD 
LAENVAESCE KGCAVIVTGR AASETWNDKN TGEKRTAMKV IADEVAPSLR FATAKITKAN
RGGGGGNSGG GQPQSQGQPS GNRSGQQQNT GGGGWGGGNG GGGWGAGGDT EPPF