Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3020 |
Symbol | |
ID | 8334371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3340491 |
End bp | 3341015 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644956166 |
Product | single-strand binding protein |
Protein accession | YP_003113770 |
Protein GI | 256392206 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.666273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0842744 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATCC CCGTCACCAT CGTCGGCCGC ATCGGACAGC CGCCCGAGCT GAAGTTCGGC TCCAGCGGCA AAGCCATCGC CCGCTTCTCC GTCGTCACCA GCCGGCGCGT TCTCGATAAG ACCTCGAACG AGTGGTCCGA CACCGACACG ACGTGGTGGA ACTGCACTGC GTTCGGCGAC CTCGCCGAGA ACGTGGCCGA ATCCTGCGAG AAAGGGTGCG CCGTCATCGT GACCGGCCGC GCAGCCTCCG AGACCTGGAA CGACAAGAAC ACCGGCGAGA AGCGCACCGC CATGAAAGTT ATCGCCGACG AGGTCGCGCC GTCGCTGCGG TTCGCCACCG CGAAGATCAC CAAGGCCAAC CGTGGCGGCG GCGGTGGGAA CTCCGGCGGC GGACAGCCCC AAAGCCAGGG CCAGCCCTCC GGCAACCGCA GCGGCCAGCA GCAGAACACG GGCGGTGGCG GCTGGGGTGG CGGGAACGGC GGCGGTGGGT GGGGAGCCGG TGGCGATACC GAGCCGCCTT TTTAG
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Protein sequence | MSIPVTIVGR IGQPPELKFG SSGKAIARFS VVTSRRVLDK TSNEWSDTDT TWWNCTAFGD LAENVAESCE KGCAVIVTGR AASETWNDKN TGEKRTAMKV IADEVAPSLR FATAKITKAN RGGGGGNSGG GQPQSQGQPS GNRSGQQQNT GGGGWGGGNG GGGWGAGGDT EPPF
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