Gene Caci_3010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3010 
Symbol 
ID8334361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3335995 
End bp3336477 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content65% 
IMG OID644956156 
Producthypothetical protein 
Protein accessionYP_003113760 
Protein GI256392196 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00776564 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0165191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGC ACGCCGTTCC CACCGCCGAC CAGATCCGCA CCTACCTGCT GGCCAACGGC 
TGGGAGGTGG GTGAGTTTGG CCGCGCCGCC TACCTGATGG TCACCAAGGG TCATACGGTT
CGGATGCTGC ACGAGCCGAC CGAGTACGAC CGGGACAAGG CCGTCTTCGA CATCGCTCTT
GCCGAGGGTC GGCATCCGGC CGACGTGCAT CAGGACATCC TGAACCTTCG CGTGCCGGCC
ATCACCGAAG AAGCTGACCT CGGCAAGCAG ATGCGGCACC GCGCGCTGGG CGCCTACCGC
CTGTTCTGGA AGTCCGGCGG ATCATCCGTG GCCGTTGTCG GGCAGCTCTA CAGCGGAGCC
CGCTGGTATG CCTGCGCGAA CTGGACGTCC CCTGATGCCG AGCGTGTCGG ACTTGTTGGT
ACTGATTGGT CGCTGATCGA ACGGGTGGAA GAGATTCCGG ACGGCGGCGA TGACGATGCC
TGA
 
Protein sequence
MSEHAVPTAD QIRTYLLANG WEVGEFGRAA YLMVTKGHTV RMLHEPTEYD RDKAVFDIAL 
AEGRHPADVH QDILNLRVPA ITEEADLGKQ MRHRALGAYR LFWKSGGSSV AVVGQLYSGA
RWYACANWTS PDAERVGLVG TDWSLIERVE EIPDGGDDDA