Gene Caci_2977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2977 
Symbol 
ID8334327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3324483 
End bp3325097 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content67% 
IMG OID644956122 
Producthypothetical protein 
Protein accessionYP_003113727 
Protein GI256392163 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0569507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0000522932 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATGCGTC GCATCGCTGC CCTGATCGCA GGGCTGTTCA TCGCCGTTGC AGCCCTCGCC 
GGCTGCTCCC ACGCCACGCC CGTGTCCTAC GCGCCCGCCG CCTACGGCGA AGTCATCGGT
GGCGCTGGCC ACTGCTACTA CGACGACGAT CCGTATGAGG CGCAGCAGCT CCTCGCCGCC
GGCCTGTGCC CCGCCGGCTG GGTTCCCACC GCGATGCCGC TGTACTGGCA CGAGGAGTAC
TACTCGTACT ACTCCAGCCC CACCTACTAC AACCGGTACG TCCTGGTGTC GCACCGCACC
GTGTACATCA CCCACGAGAC CACGTTCCAC ACCACCTACT CCTCGCAGAT CTCCACCGCA
TCGGCAAAGG CCGCCTACAA GGGCAGCAAC GGCAAGACGG TGACCGGCAC CACGGCGAAG
ATGAAGTTCT CCAGCGGCTC CGGCAGCACC GGGAAGGTCG GCGGCGGATC CCTGCGCAGC
GGAACCACGG GCGGCTCTAC TGGCGGTAGC AGTGGGAGTT CCGGCTCGGG TAGCGGCAAG
TCGAGCACGA CCGTGAAGTC GAAGTCCGGC AGCGGCAGCA GCGGCGGCGG CTCTCTGCGG
AGTGGTCGCA AGTGA
 
Protein sequence
MMRRIAALIA GLFIAVAALA GCSHATPVSY APAAYGEVIG GAGHCYYDDD PYEAQQLLAA 
GLCPAGWVPT AMPLYWHEEY YSYYSSPTYY NRYVLVSHRT VYITHETTFH TTYSSQISTA
SAKAAYKGSN GKTVTGTTAK MKFSSGSGST GKVGGGSLRS GTTGGSTGGS SGSSGSGSGK
SSTTVKSKSG SGSSGGGSLR SGRK