| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2962 |
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| Symbol | |
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| ID | 8334312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3316780 |
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| End bp | 3318033 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644956107 |
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| Product | transposase, IS605 OrfB family |
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| Protein accession | YP_003113712 |
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| Protein GI | 256392148 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0190822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.000536788 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCAGCTCC GGTATAACTT CCGCCTTGAC CCGACGCCCG GTCAGCGCGA TGCGCTGACG
AAGGCGTTTG GGTGTGCACG GTGGGTGTAT AACCAAGCGC TGGCCATAAG GAAGTCTTCC
TACGAGGAGG GTGGCGGCTG GATCGCTAGT GAGGTCCTGT CAAAACGGTT GATTACCGAG
GCGAAGAAGA GCTCCGAGAC TGCATGGCTC GGGAGTGTTT CCGTTGTCGT GCTTCAACAG
GCTTTGCGGG ACAACGATGT TGCGTACAAG AACTTCTTCG ACTCCGCCAC GGGGCGGCGT
AAGGGCGTGC GTGCTGGCAA GCCCCGGTTC CGCTCCCGGC GCGACAACAG GCAGGCGATC
CGGTTCACTG CGAACTCCAA GTTCAAGATC ATGAAGTCGG GTCGGCTGTC TTTGCCGAAG
ATCGGCGAGG TCGCGGTCCG CTGGTCGCGG GACCTGCCGT CCGACCCGTC GTCGGTGACC
GTCATCAAGG ACGCGTCGGG CCGGTACTTC GCTTCGTTCG TCGTCCAGAC CGACCCGGCG
GCGGATGCCG AACGGTTCCC GGCCGGCGAC GCCTACGCGG AGACCGGCAT AGATCTGGGT
CTCACACACT TTGTCGTCCG GGACAACGGC GAGAAGATCG ACGCACCGAG GTTCCTGCGC
AAGGCCGAAC AGCGGCTCAA GAAGCTCCAA CAGTCACTCG CGCGGAAACA GAAGGGCTCG
AACAATCGAG CCAAGGCGCG AGTGAAGGTC GCGAAGGCTC ACGCCCACGT TGCCGATGCT
CGCAAGGACT TCCACCACAA GCTGTCGACC ACGATCATCC GCGAGAACCA AGCGGTGTAC
GTGGAAGACC TCGCGGCAAG CAGCATGGCA CGGTCGCGTA TGAACGGCAT GGCAAAGTCG
GTGCACGACG CCGGCTGGTC CAACTTCGTG CGGATGCTGG AGTACAAGTC CGCGCGGTAC
GGACGGACGT TCGCGAAAAT GGACCGGTGG GCGCCGACGT CACAGGTCTG CTCAGCGTGC
GGCGTAAAGG ACGGACCGAA GCCACTGAAG GTGCGAGGCT GGACGTGCGG CGCCTGCGGC
GTGCACCATG ACCGGGACGT CAACGCGGCA CGCAACATCC TTACTCTTGG AAGGCAGGTC
GCGGCGGGAC GCGCCGAGAC TGAAAATGCC TGTGGAGGGG ACGTAAGACC GCAGCTTGCT
GTGGCAGGCC CCGATGAAGC AGGAACCCAC CTAGGCGACC GGACACTCGC GTGA
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| Protein sequence | MQLRYNFRLD PTPGQRDALT KAFGCARWVY NQALAIRKSS YEEGGGWIAS EVLSKRLITE
AKKSSETAWL GSVSVVVLQQ ALRDNDVAYK NFFDSATGRR KGVRAGKPRF RSRRDNRQAI
RFTANSKFKI MKSGRLSLPK IGEVAVRWSR DLPSDPSSVT VIKDASGRYF ASFVVQTDPA
ADAERFPAGD AYAETGIDLG LTHFVVRDNG EKIDAPRFLR KAEQRLKKLQ QSLARKQKGS
NNRAKARVKV AKAHAHVADA RKDFHHKLST TIIRENQAVY VEDLAASSMA RSRMNGMAKS
VHDAGWSNFV RMLEYKSARY GRTFAKMDRW APTSQVCSAC GVKDGPKPLK VRGWTCGACG
VHHDRDVNAA RNILTLGRQV AAGRAETENA CGGDVRPQLA VAGPDEAGTH LGDRTLA
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