| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2947 |
|---|
| Symbol | |
|---|
| ID | 8334297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 3308838 |
|---|
| End bp | 3309056 |
|---|
| Gene Length | 219 bp |
|---|
| Protein Length | 72 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644956092 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003113697 |
|---|
| Protein GI | 256392133 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00166703 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.000309132 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGATT CGCAAATGAC TGTCGCCGAC GACGCCAGCA CGTTCCCGCC GCAGGGCCGA
CTCATCCACG TGGCCCATGG GTTCCAGTGG AACAGCATCG CGGAGTTGCT CCAGCGGGCC
GGCGTGACGC TGTTCGAAAT TCCGCCCGGC CCGTCCGTAC CCGACCAGGC CGGCGAAGAC
ATCCCGACGT TCGGGCTCAT GCTGAGGAGT GGTGAGTAA
|
|---|
| Protein sequence | MSDSQMTVAD DASTFPPQGR LIHVAHGFQW NSIAELLQRA GVTLFEIPPG PSVPDQAGED
IPTFGLMLRS GE
|
|---|
| |