| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2945 |
|---|
| Symbol | |
|---|
| ID | 8334295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 3307765 |
|---|
| End bp | 3308157 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644956090 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003113695 |
|---|
| Protein GI | 256392131 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00288658 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.000375971 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCA CGAACGCCAG CCTCGCCACC ACCGCCCGCG TCCTGCGCAC CCACGCCGCC
CGGACCCGCG TCGGCACGCA CATGTCGGTC GCCCGCCGCT ATGCGGTCTT GGACGCGCTG
ATCGCCCGCA CCAACGGCGC CCTGATCACC GCCGCGTCCT ATCTCGCCGG CATCGGTGCC
GACCAGGCGT TTATTGACCG CTTCGGCTCC GCATTCGGCA CGAAGGCCTC GAAGGCTTAT
CAGGCCAAGT TCGGCTGCAA GTCGCGCCGC ACCGGTCTCG CCCGTCGCGG ACTGCGCCTG
TTCGACGCGT TTGCCTACAC CGCCAACGAG ATGCCGATCC TGAACGAGGC TGCCCGCAGC
TACGCGCGTA CCAGCAACCT GATCGCCGCC TGA
|
|---|
| Protein sequence | MTTTNASLAT TARVLRTHAA RTRVGTHMSV ARRYAVLDAL IARTNGALIT AASYLAGIGA
DQAFIDRFGS AFGTKASKAY QAKFGCKSRR TGLARRGLRL FDAFAYTANE MPILNEAARS
YARTSNLIAA
|
|---|
| |