Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2847 |
Symbol | |
ID | 8334196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3251120 |
End bp | 3252958 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644955991 |
Product | hypothetical protein |
Protein accession | YP_003113597 |
Protein GI | 256392033 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00682815 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00280145 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCTTG CCGGCGACGG GCTGAGCGTC CACAACCGCA GGCCCGAACG AGTTGCCGCG CAGATCACAC AGGACCCCGC AAGTACGTTG CCAGCCCTGG CCGTCGGCGG CGACGTACTC GTTACCGGCT CCATGTCCGT AGGTGGCGTT AAGGCCGGCG GTACTGCGGC AATCGGTCAG GTACAGGCCG CAACGTCGAC GGCCGCCTCA CTATGGATGT CGGCAGTCAA CGTCGGATCC TGGGTCTTTG ACGTCCGCAC CCACGGCGCT GTCGGCGACG GGCAGGCAGC CACGGACGGC GCCATTACCA ACGGCCAGAA CATCCTTACC TGCGGCACGT CGAAGCCGTT CAAGCCGGCC GACGTCGGCA AGTGGGTCAT GGTGAAGGGC GCGCTTTCCT CCGGCGCCAC GACTTTGGTG ACCAGAATCA CCGGCTACAC GTCACCCTCC ACTGTGACCC TCGGCGCTAA CGCCACCAAC ACAATGTCCG GCAACGCGCT GGTGATGTGG GCCACCGACG ATACCGCCGC GCTGCAGGCC ACAATCAACG CCGCGTTCGC CTACGGGCAA ATCAACGGCA CCGCGATTGT GTGGGTACCG CCGACCGGAA GCGGCCTGTT CTACGGCGTG GCCGGCCCGC TGGTTGCCGG AGGAACGACC AAGGCCAACG GGCAACTGGT GATCCCGATT CAGGCGACCA CTAGCGGCAA GGTCGCCCTG ATCATCTTGG GAGCGACTGA CGGCGGCGCG ACACGACACT GGGAACAAAA GATTCCGCAG CTGTCGGGCA GCACGCTGGT TTCGTTCGGC GCGTTCGCAA CGTCCACCGC GCAGACAAAC GCGCTGAACG CCAACGGCCA GGCGGCGGTC ATCTCTGGAC AGACCGGCGC CAACGGCTAC GGCACGGACG CGCTGCTGTA CAACAACGTG ATCGTGCGGA TGCAGAACAT CCAGGTCTAC ACCACACACT CGCTGAACGG CTGGACCTAC GGCGCCCTGA ACTTCCACGG CCTTGCCGCT GCCGCGCTGG AGAACTTCGG ATACGGGACG GCGGCGACCT ACGCCCCGAA CGGCGGGGAC TACAGCAACC CCGACGGCTT CTCCGCTGGC CTCGCCATCG GTGTACTACT ACCCTCCGCC GGCAACAACG ACAACAACCA GCTGCGCAAC GTGACCTGCC ACGGCGGGTA CACGCGGGCG ATTTTCGTGA CCGAGCACAC CGAGTGGGTC GGCGGCACAA TCCTCTACAG CTGGTCGGGC GTGTGCCCGG TCGGCAACTA CGGCGACGGC GGGAACGGCG TCGGAGCATC GCACGGCATC TTCATTGACC AGGTCAGCAT CGAGGGCTGC AATAACCAGC TGGAGTTTAT CGGCCCTGGG CAAAGCGGGG TCGGTCCGAT GATGTCGGGA TCCTACGATA CCGAAGGCCA GTCCACGATC CGTGACAACT CGGGCGGGCT GGCGGCGGCG TGCGGTGAGT TCCACGTCAA GAGCAACGGG GTGGCGCAAT CCCCAGCCGT GGGTGCGGGT ACACCACTGA ACTTGATTTG TGATTTCCAG CTCCCGGGCC CGCTTGCGAG CCCGCCAGCG CTGACGGCCG GCCAAGCATT CCAGAATCCT TATGGACGCT GGGCGACCGT AACGCTGCAG GGCGGAACGT CGGTTACGGC GGTTCAGCTT GGCGCCCTAA GGGGCGGTTC CGCCGCGCCG ACGATGACCA GCGTCTACAC GCAGGCCTCC GGCACGCTAC CCCTGTATCA GGTGCGCGTA CCGCCACTGG GCTGGGTCCA GGTCAACGGG TCGGTGGCGC CGACCGTCGC GAGCTGGGTG CTCGAGTGA
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Protein sequence | MSLAGDGLSV HNRRPERVAA QITQDPASTL PALAVGGDVL VTGSMSVGGV KAGGTAAIGQ VQAATSTAAS LWMSAVNVGS WVFDVRTHGA VGDGQAATDG AITNGQNILT CGTSKPFKPA DVGKWVMVKG ALSSGATTLV TRITGYTSPS TVTLGANATN TMSGNALVMW ATDDTAALQA TINAAFAYGQ INGTAIVWVP PTGSGLFYGV AGPLVAGGTT KANGQLVIPI QATTSGKVAL IILGATDGGA TRHWEQKIPQ LSGSTLVSFG AFATSTAQTN ALNANGQAAV ISGQTGANGY GTDALLYNNV IVRMQNIQVY TTHSLNGWTY GALNFHGLAA AALENFGYGT AATYAPNGGD YSNPDGFSAG LAIGVLLPSA GNNDNNQLRN VTCHGGYTRA IFVTEHTEWV GGTILYSWSG VCPVGNYGDG GNGVGASHGI FIDQVSIEGC NNQLEFIGPG QSGVGPMMSG SYDTEGQSTI RDNSGGLAAA CGEFHVKSNG VAQSPAVGAG TPLNLICDFQ LPGPLASPPA LTAGQAFQNP YGRWATVTLQ GGTSVTAVQL GALRGGSAAP TMTSVYTQAS GTLPLYQVRV PPLGWVQVNG SVAPTVASWV LE
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