Gene Caci_2847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2847 
Symbol 
ID8334196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3251120 
End bp3252958 
Gene Length1839 bp 
Protein Length612 aa 
Translation table11 
GC content66% 
IMG OID644955991 
Producthypothetical protein 
Protein accessionYP_003113597 
Protein GI256392033 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00682815 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00280145 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCTTG CCGGCGACGG GCTGAGCGTC CACAACCGCA GGCCCGAACG AGTTGCCGCG 
CAGATCACAC AGGACCCCGC AAGTACGTTG CCAGCCCTGG CCGTCGGCGG CGACGTACTC
GTTACCGGCT CCATGTCCGT AGGTGGCGTT AAGGCCGGCG GTACTGCGGC AATCGGTCAG
GTACAGGCCG CAACGTCGAC GGCCGCCTCA CTATGGATGT CGGCAGTCAA CGTCGGATCC
TGGGTCTTTG ACGTCCGCAC CCACGGCGCT GTCGGCGACG GGCAGGCAGC CACGGACGGC
GCCATTACCA ACGGCCAGAA CATCCTTACC TGCGGCACGT CGAAGCCGTT CAAGCCGGCC
GACGTCGGCA AGTGGGTCAT GGTGAAGGGC GCGCTTTCCT CCGGCGCCAC GACTTTGGTG
ACCAGAATCA CCGGCTACAC GTCACCCTCC ACTGTGACCC TCGGCGCTAA CGCCACCAAC
ACAATGTCCG GCAACGCGCT GGTGATGTGG GCCACCGACG ATACCGCCGC GCTGCAGGCC
ACAATCAACG CCGCGTTCGC CTACGGGCAA ATCAACGGCA CCGCGATTGT GTGGGTACCG
CCGACCGGAA GCGGCCTGTT CTACGGCGTG GCCGGCCCGC TGGTTGCCGG AGGAACGACC
AAGGCCAACG GGCAACTGGT GATCCCGATT CAGGCGACCA CTAGCGGCAA GGTCGCCCTG
ATCATCTTGG GAGCGACTGA CGGCGGCGCG ACACGACACT GGGAACAAAA GATTCCGCAG
CTGTCGGGCA GCACGCTGGT TTCGTTCGGC GCGTTCGCAA CGTCCACCGC GCAGACAAAC
GCGCTGAACG CCAACGGCCA GGCGGCGGTC ATCTCTGGAC AGACCGGCGC CAACGGCTAC
GGCACGGACG CGCTGCTGTA CAACAACGTG ATCGTGCGGA TGCAGAACAT CCAGGTCTAC
ACCACACACT CGCTGAACGG CTGGACCTAC GGCGCCCTGA ACTTCCACGG CCTTGCCGCT
GCCGCGCTGG AGAACTTCGG ATACGGGACG GCGGCGACCT ACGCCCCGAA CGGCGGGGAC
TACAGCAACC CCGACGGCTT CTCCGCTGGC CTCGCCATCG GTGTACTACT ACCCTCCGCC
GGCAACAACG ACAACAACCA GCTGCGCAAC GTGACCTGCC ACGGCGGGTA CACGCGGGCG
ATTTTCGTGA CCGAGCACAC CGAGTGGGTC GGCGGCACAA TCCTCTACAG CTGGTCGGGC
GTGTGCCCGG TCGGCAACTA CGGCGACGGC GGGAACGGCG TCGGAGCATC GCACGGCATC
TTCATTGACC AGGTCAGCAT CGAGGGCTGC AATAACCAGC TGGAGTTTAT CGGCCCTGGG
CAAAGCGGGG TCGGTCCGAT GATGTCGGGA TCCTACGATA CCGAAGGCCA GTCCACGATC
CGTGACAACT CGGGCGGGCT GGCGGCGGCG TGCGGTGAGT TCCACGTCAA GAGCAACGGG
GTGGCGCAAT CCCCAGCCGT GGGTGCGGGT ACACCACTGA ACTTGATTTG TGATTTCCAG
CTCCCGGGCC CGCTTGCGAG CCCGCCAGCG CTGACGGCCG GCCAAGCATT CCAGAATCCT
TATGGACGCT GGGCGACCGT AACGCTGCAG GGCGGAACGT CGGTTACGGC GGTTCAGCTT
GGCGCCCTAA GGGGCGGTTC CGCCGCGCCG ACGATGACCA GCGTCTACAC GCAGGCCTCC
GGCACGCTAC CCCTGTATCA GGTGCGCGTA CCGCCACTGG GCTGGGTCCA GGTCAACGGG
TCGGTGGCGC CGACCGTCGC GAGCTGGGTG CTCGAGTGA
 
Protein sequence
MSLAGDGLSV HNRRPERVAA QITQDPASTL PALAVGGDVL VTGSMSVGGV KAGGTAAIGQ 
VQAATSTAAS LWMSAVNVGS WVFDVRTHGA VGDGQAATDG AITNGQNILT CGTSKPFKPA
DVGKWVMVKG ALSSGATTLV TRITGYTSPS TVTLGANATN TMSGNALVMW ATDDTAALQA
TINAAFAYGQ INGTAIVWVP PTGSGLFYGV AGPLVAGGTT KANGQLVIPI QATTSGKVAL
IILGATDGGA TRHWEQKIPQ LSGSTLVSFG AFATSTAQTN ALNANGQAAV ISGQTGANGY
GTDALLYNNV IVRMQNIQVY TTHSLNGWTY GALNFHGLAA AALENFGYGT AATYAPNGGD
YSNPDGFSAG LAIGVLLPSA GNNDNNQLRN VTCHGGYTRA IFVTEHTEWV GGTILYSWSG
VCPVGNYGDG GNGVGASHGI FIDQVSIEGC NNQLEFIGPG QSGVGPMMSG SYDTEGQSTI
RDNSGGLAAA CGEFHVKSNG VAQSPAVGAG TPLNLICDFQ LPGPLASPPA LTAGQAFQNP
YGRWATVTLQ GGTSVTAVQL GALRGGSAAP TMTSVYTQAS GTLPLYQVRV PPLGWVQVNG
SVAPTVASWV LE