Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2781 |
Symbol | |
ID | 8334130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3192128 |
End bp | 3193735 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644955929 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003113535 |
Protein GI | 256391971 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGACA ATGGACTGAT ATCGCCGACT CCGCCTCGCC GGGCGGGTCG CAAGGAGTGG ATCGGGTTGG CGGTGCTGGT TCTTCCGTGC CTGCTGATCT CGATGGACAT GTCGGTGTTG TTGTTCGGGC TGCCGTTTAT CAGCGCGTCG CTGAAGCCCA GCGCTACACA GCAGCTGTGG ATCATGGACG CGTACGGTTT CGCCCTGGCG GGGGTGCTGA TCACGATGGG GGCGGTCGGT GACCGGATCG GCCGTCGCCG ACTGCTGTTG GCGGGTACCG CGGCCTTCGG CGGGGCGTCG GCCGTCGCCG CCTACGCTGG CAGCGCGGAT CTGCTGATCG CCAGCCGGGC GCTGCTCGGC CTGGCCGGCG CCACGCTGAT GCCCTCGACG ATGGCCCTGA TCCGCAACAT GTTCCACGAC GAGAAGCAGC GCAACAGCGC GATCGGCCTG TGGACCGGGG GAATCGTCGG CGGCGCCACC CTGGGCCCGG TCGTCGGCGG TCTGCTGTTG GACCACTTCT GGTGGGGCTC GGTCTTCCTG ATCAACCTGC CGGCCATGGC CCTGCTGCTG GTCCTCGGGC CGATCCTGCT GCCGGAGTTC AAGATGCCGG CCGACGGCCG CCGCTTCGAC TATGCCGGCT CGGTGCTGTC CATCGCCGCG GTTCTGCCAA CCGTGTACGG GGTCAAGCAG CTCGCGGTCG ACGGGTACAG CGCCGGCGCG CTGGCCGCCG TCGCCCTCGG GATCGCCTTG GGCATCGCGT TCCTGATCCG GCAGCGCACC GCCGCCGATC CGCTGATCGA CACCGCCTTG TTCGGCACCA CGGCCTTCCG CGTACCAGTG CTGGTCAACG CGCTCGGCAA CTTCGTCATG ATCGGATTCA GCCTCTACAA CACGCAGTAC CTGCAGTCGG TGGCCGGGAT GCGGCCGTTC ACCGCGGCGC TGTGGTCGCT GGCCGTGCTC CCGGCCGTCA GCGTCGGCAT GGCCGTCACC GGAACGCTGA CGACGAGAAT CCGCCCGGCG ACGCTCATCG GCGGCGGCTT CCTGATCGCC GCCGCCGGGG CGGCCGTCCT GCTGCTGGTC CGCCCCGGCA ACCCGGTGGC CGTGCTGCTG ATCGGCGCGG GCGCGGTGGC CTGCGGCATG GTCGCGGCCC AGACCATCGC CGGCACCATG GTCATGACCG CCGCCTCGGC CGAACGCGCC GGCTCCGCGT CGGCGCTGAA CGAGACCGGC TCCGAACTCG GCAGCGCCCT GGGCATGGCC CTGCTCGGCA GCATCGGCGC CGCCGTCTAC CACCACAAGA TGAGCGGGCA GACCCCGGCC GGTATACCCG CCGACGCGAT CGCCCAGAGC CACCAGACCC TGGGCAGCGC CGTGGCCGTC GCGGACCAGT ACCCCGGCCC GGTGAGCCGG CACCTGCTCG GTGCCGCCCG CGACGCCTAC ACCGTCGGCT TCCACGTCGC CGCCGTCACC GGCGCGGTCC TGCTGACCCT CACCGGCCTG TACGTGATGA GCGTCCTGCG CCACGAGCCG CCGCTGCCGG CCGCTCCCGA GAAGGAGAAG GCGCCCAAGC ACGCCGGGCA GCGGAGCGAG GAGCCCATCT CGGTCTGA
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Protein sequence | MIDNGLISPT PPRRAGRKEW IGLAVLVLPC LLISMDMSVL LFGLPFISAS LKPSATQQLW IMDAYGFALA GVLITMGAVG DRIGRRRLLL AGTAAFGGAS AVAAYAGSAD LLIASRALLG LAGATLMPST MALIRNMFHD EKQRNSAIGL WTGGIVGGAT LGPVVGGLLL DHFWWGSVFL INLPAMALLL VLGPILLPEF KMPADGRRFD YAGSVLSIAA VLPTVYGVKQ LAVDGYSAGA LAAVALGIAL GIAFLIRQRT AADPLIDTAL FGTTAFRVPV LVNALGNFVM IGFSLYNTQY LQSVAGMRPF TAALWSLAVL PAVSVGMAVT GTLTTRIRPA TLIGGGFLIA AAGAAVLLLV RPGNPVAVLL IGAGAVACGM VAAQTIAGTM VMTAASAERA GSASALNETG SELGSALGMA LLGSIGAAVY HHKMSGQTPA GIPADAIAQS HQTLGSAVAV ADQYPGPVSR HLLGAARDAY TVGFHVAAVT GAVLLTLTGL YVMSVLRHEP PLPAAPEKEK APKHAGQRSE EPISV
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