Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2778 |
Symbol | |
ID | 8334127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3188093 |
End bp | 3188851 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644955926 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003113532 |
Protein GI | 256391968 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCACAC TCACAGGTAA GACGGCACTG GTCACCGGCG CGAGCCGGGG CATCGGGCAG GGCATCGCCC TTCGGCTGGC GGCGGACGGC GCGCGCGTCG CCGTCCACTA CAACGCCAAT GAGGACGCTG CGAAGCAAAC CGTCGCCACG ATCGAGGCGG CCGGCGCCGA AGCCTTCGCC ATCCAGGCCG AACTCGGCAT ACCCGGCGAC GCCCGCACCC TGTGGGCAGC CTTCGACGCC CGCGCGGAGG GCGTCGACAT CATCGTCAAC AACGCGGCCG TGCCCGGACC CTACGGACAC CTCGGCGCCA TCGACCCCGA CGAGTTCGAC AAGGTCTTCG CGGTCAACGC CAAGGCGCCG TTCTTCGTCA CCCAGGAGGG CCTGACCCGC CTGCGGGACG GAGGACGGGT CATCAACATC TCCACCGGCC TGACCCGCAC GGCGGCGATG TCCGAACTCA TCGCCTACGC GATGTCCAAA GGAGCGATCG ACGTCTTCAC CGTCAACCTC GCCAAGGATC TCGGCACGCG CGGCATCACC GTCAACACGA TCGCGCCGGG CGTCGTCGAC ACCGACGTCA ACGCGACCTG GCTCCGCGGC AACGACCAAG CTCTCGCAGC GACCGCAGCC CTATCGCCCC TGAACCGCGT CGCCGATCCC GCCGAGATCG CTGACATCGC CGCGTTCCTG GCCTCCGACG ACAGCCGGTG GGTAACCGGG CAGTGGATCG ATGCGACCGG CGGGGCGCTC ATCATCTGA
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Protein sequence | MGTLTGKTAL VTGASRGIGQ GIALRLAADG ARVAVHYNAN EDAAKQTVAT IEAAGAEAFA IQAELGIPGD ARTLWAAFDA RAEGVDIIVN NAAVPGPYGH LGAIDPDEFD KVFAVNAKAP FFVTQEGLTR LRDGGRVINI STGLTRTAAM SELIAYAMSK GAIDVFTVNL AKDLGTRGIT VNTIAPGVVD TDVNATWLRG NDQALAATAA LSPLNRVADP AEIADIAAFL ASDDSRWVTG QWIDATGGAL II
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