Gene Caci_2738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2738 
Symbol 
ID8334087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3139702 
End bp3141108 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content70% 
IMG OID644955887 
ProductRicin B lectin 
Protein accessionYP_003113493 
Protein GI256391929 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.16823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.176429 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATCAG ACATGACGCC CGAGCCTGAG GGCACCGTGG CGAAGGCCGG CTGGGCGCGA 
TCCCAGCCGA GGCCGGCGAC GAGGGCCGTG ATGGCGGTGG CGGCGGTGCT GGCGCTCCTC
GCGGGGTTGC TCGCGATCGG GCAGGCCTCG GCCCGATCCG CGCCGTCCGC CGCGTCGCCG
GCCACCACCC AGCGCGGCCC GGACCCGACC GTCGGCATGA TCGAGGCCAC GCGCGGACCG
TTCGCCACGG CGCAGGTCGC GATGCCCACC GGGCACGGTT TCGGCGGCGG GATGATCTAC
TACCCGACCG ACACCAGCCA GGGCACGTGG GGCGTGTTGG CGATCGTGCC GGGTTACTCG
GCGCTGTTCG CCGACGAAGA GGCCTGGATG GGCCCGTGGC TGTCGTCCTT CGGCTTCGTC
GTGGTCGGGG TCGAGACCAA CACCCGCACC GACAGCGACT CCCAGCGCGC CGCCGACCTG
TTGGCGGCAC TGGACTACCT GACGACCCAG AGCCCGGTGC GCACCCAGGT CGATCCGGCC
CGGATGGCGG TGCTGGGCCA CTCCGCCGGC GGCGCCGGAG CCATCGAAGC CGCCGAACAG
CGCCCCTCTC TCAGGGCCCT GATCGGCCTG GCGCCCGGAT TCCCCGGCCA GGGACTGAGC
ATGGCCGCCG ACACCGTCCC GGCACTGATC ATCGGCGGCC AGAACGACGG GACCGTCACG
CCGTCCTACC TCTCCAGCCT GTACGGCACA CTGCCGGCCT CGACACAGAG CGCCTTCGCC
CAGATCGCCG GCGCCGACCA CGTCTACTAC ACGCACCCGA ACAACGTCGA GATGAAGCTG
ATCATCCCGT GGCTGAAGGT CTTCGTGGAC AGCGACACCC GCTACACGCA GTTCCTGTGC
CCCTCGCTCC CCGACCCGAG CACGATCTCG GCCTACCAAC CGAAGTGCCC GTACATCCCG
CCGGGCGGCT CGTCATCGCC GAGCTCGTCC TCCTCGTCGA GCTCCGCGCC CCCGCCGAAC
TCCGCGCCGC TGCACGCGGT GGGCGCCGCC AAGTGTCTCG ACGTGCCGAA CTCCAGCACC
ACCGCCGGCA CGCAGCTGCA GATCTACACC TGCTCCAACG GCGCCAACCA GCTGATCACC
CACACCGGCT CGAACCAGCT CACCGTCTAC TCCAGCACCA TGTGCCTGGA CGCCAACAAC
AAGGGAACCA CCAACGGCAC CAAGGTGATC ATCTGGCCCT GCAACGGCCA GTCGAACCAG
CAGTGGAACC TGAACCCCAA CGGCACCATC ACCAGCGCCG CATCAGGACT CTGTCTCGAC
GTGACCGGAG CCTCCACGGC CAACGGCGCA CTGGTCCAGC TGTGGACCTG CAACGGCGGA
TCCAACCAAC AATGGCACCT CGGATGA
 
Protein sequence
MRSDMTPEPE GTVAKAGWAR SQPRPATRAV MAVAAVLALL AGLLAIGQAS ARSAPSAASP 
ATTQRGPDPT VGMIEATRGP FATAQVAMPT GHGFGGGMIY YPTDTSQGTW GVLAIVPGYS
ALFADEEAWM GPWLSSFGFV VVGVETNTRT DSDSQRAADL LAALDYLTTQ SPVRTQVDPA
RMAVLGHSAG GAGAIEAAEQ RPSLRALIGL APGFPGQGLS MAADTVPALI IGGQNDGTVT
PSYLSSLYGT LPASTQSAFA QIAGADHVYY THPNNVEMKL IIPWLKVFVD SDTRYTQFLC
PSLPDPSTIS AYQPKCPYIP PGGSSSPSSS SSSSSAPPPN SAPLHAVGAA KCLDVPNSST
TAGTQLQIYT CSNGANQLIT HTGSNQLTVY SSTMCLDANN KGTTNGTKVI IWPCNGQSNQ
QWNLNPNGTI TSAASGLCLD VTGASTANGA LVQLWTCNGG SNQQWHLG