Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2647 |
Symbol | |
ID | 8333996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3032992 |
End bp | 3033696 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644955798 |
Product | FHA domain containing protein |
Protein accession | YP_003113404 |
Protein GI | 256391840 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1716] FOG: FHA domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.345836 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATGC TCGACCGTTT CGAACGGCGA CTGGAGAACT TGATCAGCGG GGGCTTCGCG CGTGCTTTCA AGGCCGAGCT CGTGCCGGCG GAGATCGCCG CGGAGCTGCG GCGGGAGTGC GACGACACGG TCGTCGTCCG CGGGCAGGGA CGCTCGGTGG CGGCCAACGA CTACGTCGTG CAGATGGCTC CCGAGGACTT CACCCGGCTC GCTCCGTACG CGACGGAGCT GGCGACACAG CTGAACGACG CTGTCCGCGC GCACGTTAAC GAGCAGCGCT ACCTCCTGGT CGGACCGCTC GCGGTACGGC TTGAGGCCGC CGAGGATCTC GCGGTCGGGG TATGCCGCGT CCGCAGTGTC ACCCTGCCGG CCAACCAGCC CTCCGGTCCG AGTCCGCAGG GTCCACAGAG TCCGCAGAGT CCGCGGCAGG CGTCGGCGCC TTGGCTGGAG ATGAACGGGA CGCGGATTCC GTTGTCCACG CGGCAGATCA TCCTCGGGCG CAGTCCGGAC GCGGATGTCC GCCTGCACGA CCCGGGGGTC TCCTCACGGC ATGCCGTGAT CCGTCTCGGC CGCTCCGCGA CCATCCAAGA CCTCGACTCC ACGAACGGAA CCTTCGTGGA CGGCCGGCGG GTCCGCAATG CCGATCTGCA CGACGGAGCC GTGATCGTCC TCGGCGGTGT TCGGGTGACG TTCCACGGCG CCTGA
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Protein sequence | MAMLDRFERR LENLISGGFA RAFKAELVPA EIAAELRREC DDTVVVRGQG RSVAANDYVV QMAPEDFTRL APYATELATQ LNDAVRAHVN EQRYLLVGPL AVRLEAAEDL AVGVCRVRSV TLPANQPSGP SPQGPQSPQS PRQASAPWLE MNGTRIPLST RQIILGRSPD ADVRLHDPGV SSRHAVIRLG RSATIQDLDS TNGTFVDGRR VRNADLHDGA VIVLGGVRVT FHGA
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