Gene Caci_2642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2642 
Symbol 
ID8333991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand- 
Start bp3025543 
End bp3026595 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content68% 
IMG OID644955793 
Product6-phosphogluconate dehydrogenase-like protein 
Protein accessionYP_003113399 
Protein GI256391835 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1023] Predicted 6-phosphogluconate dehydrogenase 
TIGRFAM ID[TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.417846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.530519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGA CCGAGCAAGG GAGACACGAC GTGCAGCTAG GAATGATCGG CCTCGGACGC 
ATGGGAGCGG ACATCGTCCG CCGGCTGATG GGCGAAGGAC ACGAATGCGT CGTCTACGAC 
CACGATCCCG CGGCCGTGGA GAAACTCGAG CACGAGGGCG CCACCGGCGT CAGCTCGCTG 
AAGGATCTGG CGGCGCAAAT GACGGCGCCG CGAGCGGTCT GGGTCATGGT CCCCGCAGGC 
GACGTCACCA CCGGCGTGAT CGAAGAGCTC GCCGCGGTCC TGGACACCGA CGACATCGTC 
ATCGACGGAG GCAACACCTA CTACCGCGAC GATCTCCAGC ACGCTCAAAC CCTGGCCCAG 
CACGGCGTGA AGCACCTGGA CTGCGGCACC AGCGGCGGCG TGTTCGGCCG CGAACGCGGC 
TACTGCCTGA TGATCGGCGG CGAAGCCGAA GCCGTGGCCC ACCTGAAGCC CATCTTCGAA 
ACCCTCGCGC CCGGCAGCGA AGGCGCCCCC CGCACCCCCG GACGCGAGAA GACGCCCCTC 
GCCGAGGAGG AGAAGGGCTA CCTGCACTGC GGACCCTCCG GCGCGGGCCA CTTCGTCAAG 
ATGATCCACA ACGGCATCGA ATACGGCATG ATGGCCTCCC TGGCCGAGGG CCTCAACATC 
CTGCGCAACG CCGACATCGG CACCCGCACC CAAACCGGCG ACGCCGAAAC CGCCCCGATG 
GAGCACCCAG AGTTCTACCG CTACGACATC GACACCGCCG CGGTGACCGA AGTCTGGCGC 
CGCGGCAGCG TGATCAGCTC CTGGCTCATG GACCTCACCG CCACCGCCCT CTACCAATCC 
CCAGACCTGG CCGATTTCCA AGGCAGCGTC TCCGACTCCG GCGAAGGCCG CTGGACCTCC 
ATCGCCGCCA TCGACGAAGG CGTCCCCGCC CCCGTCCTCA CCACAGCCCT GTACTCCCGC 
TTCAGCTCCC GCCGCCTCGA CGACTTCGCC GACAGAGCCC TGTCCGCCAT GCGCAAGCAG 
TTCGGCGGCC ACGCCGAGAA GCACGACTCC TGA
 
Protein sequence
MTQTEQGRHD VQLGMIGLGR MGADIVRRLM GEGHECVVYD HDPAAVEKLE HEGATGVSSL 
KDLAAQMTAP RAVWVMVPAG DVTTGVIEEL AAVLDTDDIV IDGGNTYYRD DLQHAQTLAQ 
HGVKHLDCGT SGGVFGRERG YCLMIGGEAE AVAHLKPIFE TLAPGSEGAP RTPGREKTPL 
AEEEKGYLHC GPSGAGHFVK MIHNGIEYGM MASLAEGLNI LRNADIGTRT QTGDAETAPM 
EHPEFYRYDI DTAAVTEVWR RGSVISSWLM DLTATALYQS PDLADFQGSV SDSGEGRWTS 
IAAIDEGVPA PVLTTALYSR FSSRRLDDFA DRALSAMRKQ FGGHAEKHDS