| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2587 |
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| Symbol | |
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| ID | 8333936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2933420 |
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| End bp | 2936017 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644955740 |
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| Product | PfaD family protein |
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| Protein accession | YP_003113346 |
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| Protein GI | 256391782 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
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| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase
[TIGR02814] PfaD family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCCT GGCTGTTCCC AGGTCAGGGC TCGCAGAAGA AGGGGATGGG GGAGCCACTG
TTCGCGGCCC GCCCCGACCT CGTGGCGATC GCGGACGCGG TCCTCGGATA CAGCATCACA
GAGCTCTGTC TCACCGACCC CGACGGCCGC CTGCGCGACA CCCGCTACTC CCAACCGGCA
CTGTTCGTGG TGGAGGCACT GGACTTCCTG AACCGCGCCG ACGACAGCCC GCCGGCCTGG
CTGGCAGGCC ACAGCCTCGG CGAATACGCA GCCCTGTTCG CCGCCGGCTG CTTCGACTTC
GAAACCGGCG TCCGCCTCGT CCACGAACGC GGCGCCCTGA TGGGCCGCGC ACGCGGAGGC
GGCATGGCCG CAGCCCTGGG CCCGATCGCC GCCCAGATCA CCGACCTGCT GTCCACACAC
GGCTACGACG ACCTCGACAT AGCGAACGAC AACGCCCCAG ACCAGGTGGT GCTATCAGGC
CCGACCAACC GCCTGGCATC CTTCGCCCCC CACGTCGAAA GCCAAGGTGG ACGCTGGGTC
CCCCTAGCGG TCAGCGCCCC ATTCCACTCA CGCGCAATGT CCGCCGCAGC CGAGGAATTC
AGCACCTTCC TCGACGGCTT CGACCTCCGC GATCCGACAA CGCCAGTCAT CTCGAACGTG
ACAGCCGAAC CCCACCAACC CGGCACACTC AGGGAACTGC TGGTCCAACA GATCCGCCGA
CCGGTCCGCT GGACAGAGAG CATGCGAGCC CTGATGGACC GCGGCGTGAC CGACGTGGTC
GAGGTAGGAC CCGGGACCGT GTTGCGCGGA CTGTGGCGGG CCAATCGCCG AGCCTACGAG
CCCAAGACGT TGCCAGAGAG CCAGAGCGCC GCGCCAGCAC CGCGATTCGT ACCGACCGCC
ACGCCGCAGT CCGCATCGCC GCAATCCGAA CCGATCGCCG CGCCGAATTT GCTCTCGAAT
CAGGCTATTG CCTCGCCGCG CCCGCCCGCC GCACCCACGC CGCACCCCGC TCCGACTGCC
CAAGCGCCGC AGCCACCGGG TCCGCCACCG AATCAGGCTG CTGCCTCAGC CCGCCTGCCC
GCCGCACCCA CGCTGCACCC CGCTCCGACC GCCCAAGCGC CGCAACCAAA ACCAGCCGCC
GCGCCGCCCC TAACGCCCGC GCCTCATCCC GCCCCACCCC CCACCTGGCG CCCCCAAGAC
CTCGGCAGCG CCGCCTTCCG CCGCGACTAC GGCGTCGAAT ACGCCTACCT GGCCGGTGCG
ATGTACCACG GCATCGCCTC CACCGATCTC GTCATCCGCA TGGGTGGCGC CGGTCTCATG
GGCTTCTTCG GCGCCGGCGG CCTGCCCCTG TCCGAGGTCG AGGCGGCGAT CCGCACCCTG
CGCCGCGAGC TCGGTCCCGA CGGCCGATTC GGCATGAACC TGCTCTGCAC TCCCGACGAT
CCCGCCCTCG AAGCCGCCGT CGTCGACCTC TACCTCCGCG AAGGCGTCCG CCACGTCGAG
GCCGCCGCTT ACACGCGCGT CACCGCGCCC CTGATCCGCT ACCGCTTCAC CGGCGCTCAC
CGGGACCGCG ACGGCCAGCC GATCGTGCGC AACCGCATCG TCGCCAAGGT CTCCCGACCC
GAGGTGGCCG CCGCCTTCCT CAGCCCGCCG CCACCCGCGC TGCTCGACCG CGTGGTCGCC
GACGGCGCCC TCACCGCCGC CGAAGCCGCC GTCGCCGCCG AGCTCCCCGT CAGCGACGAC
ATCTGCGTCG AGTCCGACTC CGGCGGCCAC ACCGACGCCG GCGCCGCGCT CACCCTCATC
CCGGCCATGC TCCGCCTCCG CGACCGCGAG ACCGCGCGCC ACGGCTATCC CGGCCGCGTG
CGCCTCGGCG CAGCAGGCGG TCTCGGGACG CCCGAAGCAC TAGCCGCCGT CTTCGTCCTG
GGCGTCGATT TCGTCGTGAC CGGCTCGGTG AATCAGTGCT CTCCTGAAGC CGGAACCTCT
GACGCCGTCA AGGATCTGCT CGCCGCCATC GGCGTCCAGG ACACCGCCTA CGCCCCGGCC
GGCGACATGT TCGAGCTCGG CGCCAAGGTG CAGGTCGTGC GCAAGGGCAC GCTGTTCGCC
GCGCGCGCGA ACAAGCTCTA CCAACTCTGG CGCCAATTCG GCTCCCTGGA AGACATCGAC
GACGCGACAC GGAAGACCGT CGAGCAGGAC TACTTCGGGC GCTCCTTCGA CCAAATCTGG
AAGGAAACCT CGGTCTATCT CGCCGAGCGC CATCCCGCGG AACTAGAGCG TGCACAACGC
GATCCGCGCC GCAGAGCCGC CTGGGTCATG CGGTGGTACT TCCGGTACTC CACGGAAGCC
GCGATCCGGG GCGAGACCGC CGAGCGAGTC AATTTCCAGA TTCACTGCGG CCCGGCGATG
GGCGCCTTCA ATGCCTGGGC GGCCGGGGGT GCGTTGTCGG ATTGGCGTAC ACGACACGTC
GACGTCATCG CGCGCGAGCT GATGGCCGGG GCGGCGCGGT GTCTGGAAGA ACGCCTGGTC
GGAGCGCGGT TCGCGGCAGA GACTCAGGCA TCGGGCGGAA TCGTCGGCGC GAGCGCGACA
AACCGTGCTC AACAGTGA
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| Protein sequence | MEAWLFPGQG SQKKGMGEPL FAARPDLVAI ADAVLGYSIT ELCLTDPDGR LRDTRYSQPA
LFVVEALDFL NRADDSPPAW LAGHSLGEYA ALFAAGCFDF ETGVRLVHER GALMGRARGG
GMAAALGPIA AQITDLLSTH GYDDLDIAND NAPDQVVLSG PTNRLASFAP HVESQGGRWV
PLAVSAPFHS RAMSAAAEEF STFLDGFDLR DPTTPVISNV TAEPHQPGTL RELLVQQIRR
PVRWTESMRA LMDRGVTDVV EVGPGTVLRG LWRANRRAYE PKTLPESQSA APAPRFVPTA
TPQSASPQSE PIAAPNLLSN QAIASPRPPA APTPHPAPTA QAPQPPGPPP NQAAASARLP
AAPTLHPAPT AQAPQPKPAA APPLTPAPHP APPPTWRPQD LGSAAFRRDY GVEYAYLAGA
MYHGIASTDL VIRMGGAGLM GFFGAGGLPL SEVEAAIRTL RRELGPDGRF GMNLLCTPDD
PALEAAVVDL YLREGVRHVE AAAYTRVTAP LIRYRFTGAH RDRDGQPIVR NRIVAKVSRP
EVAAAFLSPP PPALLDRVVA DGALTAAEAA VAAELPVSDD ICVESDSGGH TDAGAALTLI
PAMLRLRDRE TARHGYPGRV RLGAAGGLGT PEALAAVFVL GVDFVVTGSV NQCSPEAGTS
DAVKDLLAAI GVQDTAYAPA GDMFELGAKV QVVRKGTLFA ARANKLYQLW RQFGSLEDID
DATRKTVEQD YFGRSFDQIW KETSVYLAER HPAELERAQR DPRRRAAWVM RWYFRYSTEA
AIRGETAERV NFQIHCGPAM GAFNAWAAGG ALSDWRTRHV DVIARELMAG AARCLEERLV
GARFAAETQA SGGIVGASAT NRAQQ
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