Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2556 |
Symbol | |
ID | 8333905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2895214 |
End bp | 2896458 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644955709 |
Product | lipolytic protein G-D-S-L family |
Protein accession | YP_003113315 |
Protein GI | 256391751 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGCA ATACCCTGAG ATCCATCGGC GCCGCGCTGG CCGGACTCGC CATGGCGGTC GCGACGTACG GTCCCGCGCA CGCCTCCGGC ACGCCCGCGG CTTCCTCCCG CGTGTCCGGC ACCAGGGTCG GCGCCTGGTC GCCGAGCATG ACCACCGGCG GCCCGTCCTT CACCGACCAG ACCCTGCGGA TGGTCGCCCA CAGCAGCGTC GCCGGCTCGA ACGCCCGCAT CACCTTGTCC AACCGGTACA GCAGCAGCCC GCTGGTCGTC GGTGCTGCGG ACATCGCTCC GCAGGCCGAC GGCGCGACGG CGGTCGCCGG TGCGACGCGG AACGTCAGGT TCGGCGGCGC GGTCCAGATC ACCGTGCCCG CCGGGCAGGA AGTGGTCAGC GACCCCATCC CGATCACCGT CGGCGCGGGG GAGAACCTGC TCGTCAGCCT CTACCTGCCC GGTCCCACCG GCACCTCCAC CTGGCACTCC GACGCCTTCG ACACGACGTA CGCGGCCTCC GGCGACCACA CCGGCGACGA CAGCGCGACC GCCTTCGGCA CGACGACCAC CTCCTGGTAC TACCTGTCCG GGCTGGACGT CGTCCCGGCG ACGGCCCAGG GCACCGTGGT CGCGTTCGGC GACTCCATCA CCGACGGCTA CCACTCCTCG ACCGGCACCT ACACGCGCTG GCCGGATCTG CTCGGCGACC GCCTCGGCTC TGGTCCGGGC CCGCAGCGGC TCAGCGTCGT GGACGCCGGC ATCGGCGGAA ACCGGGTGCT CACCGACGTC CCGAACCTCT GGCAGGGTGT CAGTGCCCTC AAACGCTTCC CGCACGACGC GCTCGGCCAG CCGCGCGTCA GCGACGTGAT CCTGCTGGAG GGCATCAACG ACATCGGCAA CAACGCCGGC CCGAACGGCG CGCCGCTGAC CGCGCAAGAC CTGATCGACG GCTATCGCAC GCTGATCAAC GAAGCGCACG CCGCACACGT ACGGATCATC GGCGCGACCC TGATGCCGAT CCTGGGCAAC GGCTACTACA CGCCGACCGC GGAGACCCTG CGGCAGGCCG TGAACCAGTG GATCCGGACC AGCGGAGCCT TCGACGGCTA CATCGACTTC GACCAGACGA TGCGCGACCC GAACAACATC GCCGCCCTCA ATCCCGTCTA CGACTCCGGC GACCATCTGC ATCCCAACGA CACGGGGATG AAGGCGATGG CGGACGCGAT CGACCTGCGC CTGCTGCGGA GCTGA
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Protein sequence | MSRNTLRSIG AALAGLAMAV ATYGPAHASG TPAASSRVSG TRVGAWSPSM TTGGPSFTDQ TLRMVAHSSV AGSNARITLS NRYSSSPLVV GAADIAPQAD GATAVAGATR NVRFGGAVQI TVPAGQEVVS DPIPITVGAG ENLLVSLYLP GPTGTSTWHS DAFDTTYAAS GDHTGDDSAT AFGTTTTSWY YLSGLDVVPA TAQGTVVAFG DSITDGYHSS TGTYTRWPDL LGDRLGSGPG PQRLSVVDAG IGGNRVLTDV PNLWQGVSAL KRFPHDALGQ PRVSDVILLE GINDIGNNAG PNGAPLTAQD LIDGYRTLIN EAHAAHVRII GATLMPILGN GYYTPTAETL RQAVNQWIRT SGAFDGYIDF DQTMRDPNNI AALNPVYDSG DHLHPNDTGM KAMADAIDLR LLRS
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