| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2426 |
|---|
| Symbol | |
|---|
| ID | 8333775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 2744991 |
|---|
| End bp | 2745857 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644955579 |
|---|
| Product | 20S proteasome A and B subunits |
|---|
| Protein accession | YP_003113185 |
|---|
| Protein GI | 256391621 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0167637 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAATCCA ACGCGGACTG GGGCTCTCGG GGCGGTCTGC CGCAGGCGTT CCTCACGCCC
GGCATCTCCT CTTTCAGCGA GTTCTTGAAG GGGTTCGCCC CCGAGTACCT GCCTTCCGGG
CGCCCCCTTC CGGGCGGCCT CGGTTCGGCC AGCGCCGCCG GCGACATCGC GCCGCACGGC
ACCACCATCG TCTCCATCGC CTTCCCCGGC GGCGTGCTGC TGGCCGGGGA CCGCCGGGCC
ACGATGGGCA ACTTCATCGC CCAGCGCGAC ATCGAGAAGG TCTTCCCGGC CGACGAGTTC
TCCGCGGTCG GCATCGCCGG CAGCGCCGGG CTGGCCGTGG AGGTGGTCCG GCTCTTCCAG
CTGGAGCTGG AGCACTACGA GAAGATCGAG GGCGTCACGC TCTCCACCGA CGGCAAGGCC
AACCGCCTGG CCACCATGAT CCGCGGCAAC CTGGCCATGG CGATGCAGGG CCTGGCCGTG
GTCCCGCTGT TCGCCGGCTA CGACGAGGAG ACCGGCCAGG GCCGGATCTT CAGCTACGAC
GTCACCGGCG GCATGTACGA GGAGCACGAC TTCTACTCGG TCGGCTCCGG CTCGATGTTC
GCCCGCGGCG CGCTCAAGAA GCTGTTCCGC CCGGACTTCA CCGCCGAGGA CGCCGCGGTC
GCGGCCGTGC AGGCGCTCTA CGACGCCGCC GACGACGACT CGGCCACCGG CGGCCCCGAC
CTGTTCCGCA AGATCTTCCC CGTCGTCGCG GTGGTCACCG AGGACGGCTA CCGGCGGCTG
CCGGACGAGG AGCTGTCCAC ACTCGTGGAA AGCATCATGG ACGCCCGGCG TGTGGTGCCG
GACGGACCCC GCTCCCCGCT GCGATAG
|
|---|
| Protein sequence | MESNADWGSR GGLPQAFLTP GISSFSEFLK GFAPEYLPSG RPLPGGLGSA SAAGDIAPHG
TTIVSIAFPG GVLLAGDRRA TMGNFIAQRD IEKVFPADEF SAVGIAGSAG LAVEVVRLFQ
LELEHYEKIE GVTLSTDGKA NRLATMIRGN LAMAMQGLAV VPLFAGYDEE TGQGRIFSYD
VTGGMYEEHD FYSVGSGSMF ARGALKKLFR PDFTAEDAAV AAVQALYDAA DDDSATGGPD
LFRKIFPVVA VVTEDGYRRL PDEELSTLVE SIMDARRVVP DGPRSPLR
|
|---|
| |