Gene Caci_2398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2398 
Symbol 
ID8333747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2715562 
End bp2716410 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content73% 
IMG OID644955551 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003113157 
Protein GI256391593 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.240634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCCT ACGTGGACGT CGACGGCTTG AACATGTACT ACGAGGTCGC CGGAGAGGGC 
GAACCGGTGA TCCTTCTCCA CGGCACCGGC GGGATCGCCG ACATCTGGCG CCCGCAGCTG
GACCTGCTCG CCGACTGGTA CCAGGTCTTC ACCCCCGAAT GCCGCGGCCA CGGCCGGACC
GCGGACGTCG AGGGCCCGTT CAGCTACGAG AACTTCGCCG ACGACCTCGC CGGCTTCATC
GAGGCGCTCG GCCTCGGACC GGTGCGGCTG GTCGGCTGGA GCAACGGCGC CGCCGTGGTC
CTGCGCCTGG CGCTGCGCCG TCCGGACCTG GTGCGCCGGC TGGTCCTCAT CGGCGGCACG
GCGGGTCCCG AGGGCGAGAC CGCGCTGGCC GCGCAGTTGG GGGAGGAGCC CGGCCGGACG
CTGCTGGCCG ACGCCTGGAA GCCGGTCTAC CAAGCCCTGT CCCCGGACGG CCCAGAGCAT
TTCGCGGTCG TCGAGGAGAA GCTGCACCAG ATGTGGCGCG AGGGGACGTC GGTCGGGATG
GACGAGATCG CCGCGCTTCC GATGCCGCTG CTGGTCATGC AGGGCGACGA CGACAGCGTC
GAGATCGCGC ACAGCGCGGC GCTGGCCGGG ACGGCGCGCG ACGGCCGCCT GGCGGTGGTC
CCGGGGACCT CGCACGCGGC GCCGCTGGAG AAGCCGGAGC TGGTGAACCT GATCCTGCTG
GACTTCTTCG AGGACAAGCC CGCCGAGCGG ATCTTCCCGC TGGGCTCGCT GCGCTCGGCG
GCTGGGCTGG GGGACCATGG CGGCCCGACC TCGGGCGGAC GGCCCGGGTT CCTTCCGTGG
GCGGCCTGA
 
Protein sequence
MGAYVDVDGL NMYYEVAGEG EPVILLHGTG GIADIWRPQL DLLADWYQVF TPECRGHGRT 
ADVEGPFSYE NFADDLAGFI EALGLGPVRL VGWSNGAAVV LRLALRRPDL VRRLVLIGGT
AGPEGETALA AQLGEEPGRT LLADAWKPVY QALSPDGPEH FAVVEEKLHQ MWREGTSVGM
DEIAALPMPL LVMQGDDDSV EIAHSAALAG TARDGRLAVV PGTSHAAPLE KPELVNLILL
DFFEDKPAER IFPLGSLRSA AGLGDHGGPT SGGRPGFLPW AA