Gene Caci_2385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2385 
Symbol 
ID8333734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2705118 
End bp2706080 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content70% 
IMG OID644955538 
ProductABC transporter related 
Protein accessionYP_003113144 
Protein GI256391580 
COG category[R] General function prediction only 
COG ID[COG4586] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACTCTG TATCCCGACC CATCATCGAA GCCGAGAACC TGTCGAAGAC CTACACGCTG 
CGCAAGAAGG CCGGCCGCCT GAAACGGGAG CGGACCACCG TCGAGGCGGT CCGCGACCTG
AACCTGGCCG TCGCCGAGGG CGAGCTGCTG GGCTACATCG GGCCCAACGG CGCCGGGAAG
TCCACCTCGA TCAAGATGTT CACCGGCATC CTGTCCCCCT CGGCCGGCAC GCTGCGGGTC
GCCGGACTGG AGCCGATCCG GGACCGCAAG CAGCTGGCCC GGCGCATCGG CGTGGTGTTC
GGGCAGCGCA CGACGCTGTG GTGGGACCTG CCGCTGCGCG ACTCCTTCGC GCTGCTGCAC
CGGATGTACG CGGTCCCGGA GGCCCGCTTC GCCGCCAACC TCAAGCGCTA CGTCGCCCTG
CTCGAGCTGG AGCCGCTGCT CGACACCCCG GTGCGCCAGC TCAGCCTCGG CCAGCGCATG
CGCGGCGACC TGACCGCCGC GCTGCTGCAC GACCCGGCCG TGCTCTACCT GGACGAGCCG
ACGATCGGGC TGGACGTCAC CAGCAAGGCC GTGGTCCGCG AGTTCCTGGC CGAGCTGAAT
CGGGAGCAGG GCACAACGAT CGTGCTGACC ACCCACGACC TGGACGATAT CGAGCGGTTG
TGCCGCCGGG TGGTGGTGAT CGACCACGGG ACCGTCGCCT ATGACGGCGA TCTGGACGCC
CTACGCGCCC GGTTCGCGGC GGACCGGACG CTGGTCGTGG ACCTCGCCGA GCCCGGTCCG
GCGATCGACG TGCCGGGCGC GACGGTGGCG CGCGTGGACG GCCCGCGCCA GTGGCTGACG
TTCCCGGCGG AGGCGAACGC GGCGGCTCTG GTGTCCGCGA TCGCGGCGCG CTATGAGTTG
TTGGACGTCT CGATCAGGGA CGCAGACATC GAAGAAGTTA TCCGCAACCT GTACACAGGC
TGA
 
Protein sequence
MNSVSRPIIE AENLSKTYTL RKKAGRLKRE RTTVEAVRDL NLAVAEGELL GYIGPNGAGK 
STSIKMFTGI LSPSAGTLRV AGLEPIRDRK QLARRIGVVF GQRTTLWWDL PLRDSFALLH
RMYAVPEARF AANLKRYVAL LELEPLLDTP VRQLSLGQRM RGDLTAALLH DPAVLYLDEP
TIGLDVTSKA VVREFLAELN REQGTTIVLT THDLDDIERL CRRVVVIDHG TVAYDGDLDA
LRARFAADRT LVVDLAEPGP AIDVPGATVA RVDGPRQWLT FPAEANAAAL VSAIAARYEL
LDVSIRDADI EEVIRNLYTG