Gene Caci_2243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2243 
Symbol 
ID8333592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2544253 
End bp2545383 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content72% 
IMG OID644955396 
Producthypothetical protein 
Protein accessionYP_003113002 
Protein GI256391438 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3429] Glucose-6-P dehydrogenase subunit 
TIGRFAM ID[TIGR00534] opcA protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0000424418 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCAAGC ACCTGGATTC CACCACCTCG GCGAAGATCG CCAGCGCCCT GATCGACATC 
CGCAAGGAGG CCGGGGCGGC CACCACGGGC GCGGTCCTGA CCCTGGTCAT CGAGACCGAC
GAGCGGCACC ACTACTACGC CCTGCGGGCC GCGCGCGAGG CCTCGCGCGC GCACCCCTCG
CGCATCCTGG TCGTGATACC GCATCCGGAA CAGCCCTTCT CCGGGCTGGA CGCCGAGGTG
CGGGTGGGCG ACGAGATGGG CCCGGGCGAA GCGGTGGTGA TGCGGCTCAA CGGCGAGCTG
GCCTCGCACG CCGACGCCGT GGTCCTGCCC CTGCTGCTGC CGGACACCCC GGTGGTCACC
TGGTGGCCGT CGGACTCCCC GGCCGGCCCG GCCGAGTCCG CGCTGGGCAA GCTGGCGATG
CGCCGGATCA CCGACGCCTC CGGCACGCAC CAGCCGACCC CGGTCGCCGA CCGGCTGCGC
GGCTACTCCC CCGGCGACAC CGACCTGGCC TGGACCCGCT GCACCCCGTG GCGCTCCATG
CTGGCCGCGG CGCTGGACCA GATGCCCTCG ACGGTGAAGA CCGTCAAGGT CACCGCGGAG
ATCGACAACG CGTCCTCGTC GCTGCTGGCG GTCTGGCTGG GCTGGCGCCT GGGCGTACCG
GTCACGCTGT CCACGGACAC CGGTCCCGGC ATCACCGGCG TGCACCTTGG CACCGACAAC
GGCGAGATCA GCCTGACCCG CCCCGACGGC ATGCTCGCGG TGCTGTCGAT GCCCGACCAG
CCCGACCGGC ACGTCGCGCT AAAGCGCCGC GAGCTGGCCG ACCTCCTCAC CGAGGAGCTG
CGCCGCCTGG ACGTCGACGA GACGTACGAG GAGGTGCTGC GGCACGTCAC CGAGCAGGAC
GTCGCGGCGA TCGAGAAGGT CGCGCCCCAG CCGGCGAAGC AGGCGACGAT CACCATGACC
GCCATCCCGG ACAGCGGCCC GCTGGGCGAG CTGCCCAAGG AGTCCGCGCA GCGCGAGGAA
GAGCTGCAGG ACCAGGCGAT CGACAAGCCC GTCGGCAAGT CCGCGGACAA GCCGGCTGGC
GACTCAGGCA AGCCCAGCAA GCCCGGCAAG CCGCAGGGCG ACGCGCCATG A
 
Protein sequence
MIKHLDSTTS AKIASALIDI RKEAGAATTG AVLTLVIETD ERHHYYALRA AREASRAHPS 
RILVVIPHPE QPFSGLDAEV RVGDEMGPGE AVVMRLNGEL ASHADAVVLP LLLPDTPVVT
WWPSDSPAGP AESALGKLAM RRITDASGTH QPTPVADRLR GYSPGDTDLA WTRCTPWRSM
LAAALDQMPS TVKTVKVTAE IDNASSSLLA VWLGWRLGVP VTLSTDTGPG ITGVHLGTDN
GEISLTRPDG MLAVLSMPDQ PDRHVALKRR ELADLLTEEL RRLDVDETYE EVLRHVTEQD
VAAIEKVAPQ PAKQATITMT AIPDSGPLGE LPKESAQREE ELQDQAIDKP VGKSADKPAG
DSGKPSKPGK PQGDAP