Gene Caci_2236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2236 
Symbol 
ID8333585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2537815 
End bp2538372 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content69% 
IMG OID644955389 
Producthypothetical protein 
Protein accessionYP_003112995 
Protein GI256391431 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000422278 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000960297 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGACATAG AACCCGCCCC CTGCCGCTGT CTGCTGTGCC AGCCCGCGAC CCCCGACGAG 
TCGCAGTGGG ACCCGCGCGA CCGCGCGATC GCCACCAACG TCCGCGACCA CGGCTGGCAC
ATCATGGGCG TCACCGGCGA CGACACCCCG GACTGGGCCT ACTCCATCGG CATGTGGCAC
ACCCACGGCG GCTACGACAT CTGCATGACA GGCCTCCCCG TCGAGAACGC CATGGCCCTG
GTCGCCAAGA TCGCCGTCCA GGTCCGCGAA GGCCGAGCAC TCGGCGCCGA GAAGCGCCGC
CTGAACGTCA TCGAAGGCTA CGAAGTCGCC ACCCGCCCAG TCCACCAGAG CTGGTACCCC
GCCATGTTCG GCGCAGGCCT CGACTTCTTC CAAACGCCCC CATGGCCGAT GCTGCAGGCA
GTCTGGCCGG ACCGCCAGGG CCGCTTTCCC TGGGAGCAAG GCGCGGACCC GGAGCGCCAA
GACCAGCAGC CCTTCCTCTG GCTGGCCCGG AACGAGCACC CGGACAGCGT CTGGGTGTCC
TCTTCCCTGA CTTTGTAG
 
Protein sequence
MDIEPAPCRC LLCQPATPDE SQWDPRDRAI ATNVRDHGWH IMGVTGDDTP DWAYSIGMWH 
THGGYDICMT GLPVENAMAL VAKIAVQVRE GRALGAEKRR LNVIEGYEVA TRPVHQSWYP
AMFGAGLDFF QTPPWPMLQA VWPDRQGRFP WEQGADPERQ DQQPFLWLAR NEHPDSVWVS
SSLTL