Gene Caci_2212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2212 
Symbol 
ID8333557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2508770 
End bp2509615 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content70% 
IMG OID644955362 
Productprotein of unknown function DUF574 
Protein accessionYP_003112972 
Protein GI256391408 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.137894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.500948 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCTG CCGCCGGGAC TCCTTGGTCC GACCCCGTCA CCACCCCTCC CCGTGAGGGC 
GCGGTCGACG CCGCGAGCCG AATAGACACC TCGAAGCCGC ACTCGGCGCG GATCTACGAC
TACTGGATCG GCGGCAAGCA GAACTTCCCG GCGGACCGCG AGGTCGCCGA CAAGATCGCC
GAGGCGGTGC CGATCGTCTC CATGCTGGCG CGGGCGAACC GGGCGTTCCT CGGGCGCGCG
GTGCGGTACG CCGCCGAGCA GGGAGTGAAG CAGTTCCTGG ACATCGGCGC AGGATTGCCG
GCCGCCGGCC CCACCCACGA GGTCGCGCAG TCGGTGCACT CCGACGCCTC GGTGGTCTAC
GTCGACAACG ACCCGCTGGT GACCGTGCAC GGCCGGGCTC TGTTGGCGGA CGAGGCACGG
ACCCGGGTCT TCGAAGGCGA CCTTCGGGAC CCGAAGGCGA TCCTGACCCA CCCGGACGTC
GCGGCGCTCA TCGACTTCGA TCAGCCGGTC GCGCTGCTCA TGGTCGCGGT TCTGCACTTC
TTCCCGGACT CGGCCGACCC GGCGGGCGTG ATCGCCACGC TGACCGAGAA CCTGGCGCCC
GGCAGCCATC TGGTCATCTC CCACGCGGGC TCCGACCTGC TGCCGACCGA CCAGGAAAAG
CTTCAGGTCT ACAACAAGGC CGCCGAGGGC GCGGCGCGCG ACCACGCGCA GATCACCGCT
TTCTTCCAAG GCTTCGACCT GGTCGACCCG GGCCTGGTGC GGGTGCCCGC GTGGCGGCCG
ACCGAGGAGC TGCCGGCGGA TATCGACCAG TACTGGATGT ACGGAGGCGT CGGCCGTAAG
CGGTGA
 
Protein sequence
MSSAAGTPWS DPVTTPPREG AVDAASRIDT SKPHSARIYD YWIGGKQNFP ADREVADKIA 
EAVPIVSMLA RANRAFLGRA VRYAAEQGVK QFLDIGAGLP AAGPTHEVAQ SVHSDASVVY
VDNDPLVTVH GRALLADEAR TRVFEGDLRD PKAILTHPDV AALIDFDQPV ALLMVAVLHF
FPDSADPAGV IATLTENLAP GSHLVISHAG SDLLPTDQEK LQVYNKAAEG AARDHAQITA
FFQGFDLVDP GLVRVPAWRP TEELPADIDQ YWMYGGVGRK R