Gene Caci_2198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2198 
Symbol 
ID8333543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2491945 
End bp2493171 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content70% 
IMG OID644955348 
Producthypothetical protein 
Protein accessionYP_003112958 
Protein GI256391394 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCGCC TCCCCGACCG ACGAAGCCTC TCCGGCCGAC AAAGCCCTTC CGGCCGACGA 
AGCCTCACCG TCCTGCTCGG CGTCTTCGCC GCCCTGAGCC TGGCCGGCTA CCTCGTGGTC
CGCGCGCTCG CCCACCCGAC GATGATCGAC ATGGTCGTCT ACCGGTTCGA GGGGCAGGCG
GTGCTCCACG GCCGCGACCT CTACGGCGCC GGCGTCAAGG TGGACACCGC TGGCGGCAAC
CAGCTGCCGG CGACGTACCC GCCCTTCGCG GCGCTGCTGT TCGCGGCGAT CAGCTGGATC
CCGGTCGGCG CGCTGAAGGT CCTGGTGACC GCCGCCAACA TCGTGTTGCT GGCGCTGGTG
GTGCACCTGG CGGCGAAGCT GATCGGCGGA TGGATGGACC GACCCGGCTT CGCCGAGCGG
TGGGCGCTCC TCGCCGCGAT CGCCGGGCTC GGGCTGTGGT TCGAGCCGGT GTGGACCACG
TTGCGCTACG GGCAGATCAA CCTGGCGTTG GCCGCGCTGA TCCTCTTCGA TCTCACGCGC
GCGCCGGGCA GCAAATGGCC GCGCGGTCTG GGAATCGGGC TGGCGACCGG CATCAAGCTG
ACCCCTGGCG TCTTCATCCT GTGGTTCCTG CTCGCCGGGC GTCGCCGCGA GGCCGCCGTC
TCGGCGCTCA GCGCCGTCGG GACCATGGCG GTCGGGTTCG TCCTGCTCCC CCACGCGTCG
GTGAAGTTCT GGCTGCACAA GGTCTTCGAC ACCGATCAGG TCGGCAAGAC CTACATCACC
GACAACCAGT CGCTGTCCGG GATGATCGCG CGGATCACGC ACATCGACGA CCCCAAGGCG
CTGTGGGCGG TCGCGGCCGT CGTCGTGGTC GCGGCGGGGC TGTGGGTGGC GGCGCGGAAC
GCGAGGCGGG GCGACGACGC GCTCGGCGCG CTCGCCTGCG CGGTCACCGG GTTGTTGATC
TCCCCGATCA GCTGGTCGCA CCACTGGGTG TGGGCCGTTC CCGTGGCGAT GCTGCTGGCT
GTGCGCGCGC CTAGGCTCGC GGTCGTGTGG TGCGCGGTGT TCCTGTCGTT CCTGATCTGG
GCGGTGCCGC ACAAGGTGAT CGGGCCCTCC CCCGATCTGA ACCCGTTGCA GATGCTGCTG
AGCTCGCTCT ATCCGTTGGC GGGACTGGCG TTCCTGCTCT GGGCCTGGAG AGAGTCCACG
CGTGCCCAGC CGGTCGTGGG CTCGTAG
 
Protein sequence
MARLPDRRSL SGRQSPSGRR SLTVLLGVFA ALSLAGYLVV RALAHPTMID MVVYRFEGQA 
VLHGRDLYGA GVKVDTAGGN QLPATYPPFA ALLFAAISWI PVGALKVLVT AANIVLLALV
VHLAAKLIGG WMDRPGFAER WALLAAIAGL GLWFEPVWTT LRYGQINLAL AALILFDLTR
APGSKWPRGL GIGLATGIKL TPGVFILWFL LAGRRREAAV SALSAVGTMA VGFVLLPHAS
VKFWLHKVFD TDQVGKTYIT DNQSLSGMIA RITHIDDPKA LWAVAAVVVV AAGLWVAARN
ARRGDDALGA LACAVTGLLI SPISWSHHWV WAVPVAMLLA VRAPRLAVVW CAVFLSFLIW
AVPHKVIGPS PDLNPLQMLL SSLYPLAGLA FLLWAWREST RAQPVVGS