Gene Caci_2141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2141 
Symbol 
ID8333486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2427846 
End bp2428325 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content68% 
IMG OID644955291 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003112901 
Protein GI256391337 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTACC CGGACCCGCG TTATTTCGCC GACACCGGCG AGGTCAGCGC CACGTTCCGG 
CCGGCCGGCG CCGAGCCCGA GATCACCTTC GCCTCCGGCG GGACCTGCAG CCTGCTGTCG
ACCTCCGACA CCTCCGGCGG TTTGTACGGA CTCTACCGCT GGGACTTCGC GGCGGCGCCG
AGCGGTCCGG GCACGCACTT CCACAAGACC ATGAGCGAGG CCTTCTTCGT CCTGAAGGGC
GCCGTGCGCC TGTTCAACGG CGAGAAGTGG GTCGAGGCGA CGCCCGGCGA CTACCTGTTC
GTGCCGCCCG GCGGGCTGCA CGCGTTCCGC AACGAGTCCG GCGAGCCGGC CTCGATGCTG
CTGATGTTCG CCCCCGGCGC GCCGCGCGAG AACTACTTCC GCGGTCTGGT CGAGGGGATG
CAGAACACGA TGGGAGAGGC TTTCTTCCTG GAGCACGACC AGTACAACGT GAAGGACTGA
 
Protein sequence
MSYPDPRYFA DTGEVSATFR PAGAEPEITF ASGGTCSLLS TSDTSGGLYG LYRWDFAAAP 
SGPGTHFHKT MSEAFFVLKG AVRLFNGEKW VEATPGDYLF VPPGGLHAFR NESGEPASML
LMFAPGAPRE NYFRGLVEGM QNTMGEAFFL EHDQYNVKD