Gene Caci_2122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2122 
Symbol 
ID8333467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2406672 
End bp2407607 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content64% 
IMG OID644955272 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003112882 
Protein GI256391318 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1178] ABC-type Fe3+ transport system, permease component 
TIGRFAM ID[TIGR03226] 2-aminoethylphosphonate ABC transporter, permease protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC TCACCGAACT CCCGCCGGCA GCACCGGTTG CCTCCACTGC TGTCGCGGCC 
GACAAAGCCC CGCGCTCCAC CGCCTGGCTC TGGTCCACTC CCCCGATCCT GTTGCTGGGC
GCGGCTTTCC TCTATCCCCT CTACCTCGTC GTCAAGCAAG CCATCGAGGG CAGCGCGCCG
GATCCGAGCA ATCCCTTCAA GGTCACCGCG TCCTTCTCGG ACACCCTGAA GGATCCTGGG
ACCCGCACCG TCGTCAAGAA CACGATCGAG ATGGCTGTCT ACTCCACCGC CGGCTGCCTT
GTGCTCGGGT TCCTTCTCGC GCTGATCATT GCTTTCGTGC CGTTTCCTGG CGCCAAGGCT
GTGTCGCGCT TCATCGATGT GTTCCTGTCG TTCCCGTCGT TTCTGATCAC TGTCTCGATC
ATGTTTCTGT ATGGGCGGGT CGGCATGGTG AACCACATTG CGGCGGCGCT CAGCGGGGGG
CGGCATGACA CTCCGGTGAA CTTCGTCGAG TACTCGCCGT GGGGGATTTG GCTGGCGGAG
CTGATCTACT TCACGCCGTT CGTGATGCGG CCTTTGCTGA CCGCTTTCTC GCAGATCGAT
GCCGGGCAGT TGGAGGTCGC CGCTTCGCTC GGGGCGCGGG CCGGGCGGGT GGTGCGGCAG
GTGATTCTGC CTGAGGCTCT GCCCGCGTTG TTCGCCGGCG GGTCGTTGGT GCTGATGCTG
ACGATGAACG AGTACGGCAT CGTCTCCTTC ACCGGCGCCA AGTATCAGAC GCTGCCGGTG
CTGATTGAGA ACTTCGCCAA GGAGCAGACC AACTACGCCG GCGCGTGTGC CCTGGCCGTC
ATCAACATCG TGCTGTCGCT GGCGCTGTTC GCCGGCTATC GCGTCCTGCT CGCGCGGATG
TCCGGAGGAG GCCGCCGTGC TGCTGTACAC GCGTAG
 
Protein sequence
MTALTELPPA APVASTAVAA DKAPRSTAWL WSTPPILLLG AAFLYPLYLV VKQAIEGSAP 
DPSNPFKVTA SFSDTLKDPG TRTVVKNTIE MAVYSTAGCL VLGFLLALII AFVPFPGAKA
VSRFIDVFLS FPSFLITVSI MFLYGRVGMV NHIAAALSGG RHDTPVNFVE YSPWGIWLAE
LIYFTPFVMR PLLTAFSQID AGQLEVAASL GARAGRVVRQ VILPEALPAL FAGGSLVLML
TMNEYGIVSF TGAKYQTLPV LIENFAKEQT NYAGACALAV INIVLSLALF AGYRVLLARM
SGGGRRAAVH A