Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2104 |
Symbol | |
ID | 8333449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2387761 |
End bp | 2388846 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644955254 |
Product | chalcone and stilbene synthase domain protein |
Protein accession | YP_003112864 |
Protein GI | 256391300 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3424] Predicted naringenin-chalcone synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.935518 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCCGCA TCGCGGCAGT CTCGTCAGCG CTCCCCTCGC ACCGCCACCG GCAGGACGAA CTGGCTTCCG CCACCGCCGA CCTGTGCGCG CTCCCCGCCA CGCGCCGCGC GCTCCTGGAC CGGCTGTACT CCAACGCCGG CGTCGACACC CGGCACACGG TGCTCCCGCT GACCGGCTAC CGGCGGCTGG ACAGCGTCGA CCGCACCAAC GACACCTATA TCGAGCACGC CACCGAGCTC GGCGAGCAGG CGGTGGCCAG CGCCCTGCGC CAGGCGGGGG TGGCCGCCGA GGACGTGGAC CTGTTCGTCA CGACCTCGGT GACCGGCGTG TCGGTGCCGT CCCTGGACGC CCGGCTGGTG CCGCGGCTCG GGATGCGCCC GGACGTGAAG CGGGTGCCGA TGTTCGGGCT CGGGTGCGTG GCCGGGGCGG CGGGGCTGTC GCGGATCCAC GACTACCTGA TGGCCTGGCC GGACCACACC GCGGTGCTGC TGGCCGTCGA GCTGTGCTCG CTGAGCGTGC CGCTGGTCGA TCCGACCGTG CCCGACCTCG TGGTCAGCGC GCTGTTCGGG GACGGCGCCG GGGCGGTGGT GGTGCACGGC GCCGACCGCC GTCCGGCGCG GGACGACGGC CGAACACCCT CCGCGCCGCG CGTCCGGATC GTCGCGACCC GCAGCGAGCT GTGCCCGAAC ACCCACGACG TGCTCGGCTG GCATCTCGGT CCGCACGGCT TCCGCATCGT GCTGACCACC GAACTCGCCG ACGTCGTGGA GCGCGAACTC GGCGGCGTGG TCAAGCGCTT CCTGGCCGAC CACGCCCTGC AGGTTCCCGA CGTCGCCGCG TGGGTCGTGC ACCCCGGCGG CCCGAAGGTG ATCGACGCGG TGCGCGACTC CCTCGAGCTG CCGGAGGAGC GGGTCGCCAC GGCGCGCGCG GCGCTGGCCG AGACCGGCAA TCTGTCGTCG GCCTCGATCG TGCACGTGCT GGCCAGGGAG CTGGCGGCGC CGGACGCCGC ACCCGGGCCG ATGGTGATCG TGGGCCTGGG ACCCGGGGTG AGCATCGAGT TGTTGTTGCT GGAGCGGCTG GGATGA
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Protein sequence | MSRIAAVSSA LPSHRHRQDE LASATADLCA LPATRRALLD RLYSNAGVDT RHTVLPLTGY RRLDSVDRTN DTYIEHATEL GEQAVASALR QAGVAAEDVD LFVTTSVTGV SVPSLDARLV PRLGMRPDVK RVPMFGLGCV AGAAGLSRIH DYLMAWPDHT AVLLAVELCS LSVPLVDPTV PDLVVSALFG DGAGAVVVHG ADRRPARDDG RTPSAPRVRI VATRSELCPN THDVLGWHLG PHGFRIVLTT ELADVVEREL GGVVKRFLAD HALQVPDVAA WVVHPGGPKV IDAVRDSLEL PEERVATARA ALAETGNLSS ASIVHVLARE LAAPDAAPGP MVIVGLGPGV SIELLLLERL G
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