Gene Caci_2104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2104 
Symbol 
ID8333449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2387761 
End bp2388846 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content74% 
IMG OID644955254 
Productchalcone and stilbene synthase domain protein 
Protein accessionYP_003112864 
Protein GI256391300 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3424] Predicted naringenin-chalcone synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.935518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCGCA TCGCGGCAGT CTCGTCAGCG CTCCCCTCGC ACCGCCACCG GCAGGACGAA 
CTGGCTTCCG CCACCGCCGA CCTGTGCGCG CTCCCCGCCA CGCGCCGCGC GCTCCTGGAC
CGGCTGTACT CCAACGCCGG CGTCGACACC CGGCACACGG TGCTCCCGCT GACCGGCTAC
CGGCGGCTGG ACAGCGTCGA CCGCACCAAC GACACCTATA TCGAGCACGC CACCGAGCTC
GGCGAGCAGG CGGTGGCCAG CGCCCTGCGC CAGGCGGGGG TGGCCGCCGA GGACGTGGAC
CTGTTCGTCA CGACCTCGGT GACCGGCGTG TCGGTGCCGT CCCTGGACGC CCGGCTGGTG
CCGCGGCTCG GGATGCGCCC GGACGTGAAG CGGGTGCCGA TGTTCGGGCT CGGGTGCGTG
GCCGGGGCGG CGGGGCTGTC GCGGATCCAC GACTACCTGA TGGCCTGGCC GGACCACACC
GCGGTGCTGC TGGCCGTCGA GCTGTGCTCG CTGAGCGTGC CGCTGGTCGA TCCGACCGTG
CCCGACCTCG TGGTCAGCGC GCTGTTCGGG GACGGCGCCG GGGCGGTGGT GGTGCACGGC
GCCGACCGCC GTCCGGCGCG GGACGACGGC CGAACACCCT CCGCGCCGCG CGTCCGGATC
GTCGCGACCC GCAGCGAGCT GTGCCCGAAC ACCCACGACG TGCTCGGCTG GCATCTCGGT
CCGCACGGCT TCCGCATCGT GCTGACCACC GAACTCGCCG ACGTCGTGGA GCGCGAACTC
GGCGGCGTGG TCAAGCGCTT CCTGGCCGAC CACGCCCTGC AGGTTCCCGA CGTCGCCGCG
TGGGTCGTGC ACCCCGGCGG CCCGAAGGTG ATCGACGCGG TGCGCGACTC CCTCGAGCTG
CCGGAGGAGC GGGTCGCCAC GGCGCGCGCG GCGCTGGCCG AGACCGGCAA TCTGTCGTCG
GCCTCGATCG TGCACGTGCT GGCCAGGGAG CTGGCGGCGC CGGACGCCGC ACCCGGGCCG
ATGGTGATCG TGGGCCTGGG ACCCGGGGTG AGCATCGAGT TGTTGTTGCT GGAGCGGCTG
GGATGA
 
Protein sequence
MSRIAAVSSA LPSHRHRQDE LASATADLCA LPATRRALLD RLYSNAGVDT RHTVLPLTGY 
RRLDSVDRTN DTYIEHATEL GEQAVASALR QAGVAAEDVD LFVTTSVTGV SVPSLDARLV
PRLGMRPDVK RVPMFGLGCV AGAAGLSRIH DYLMAWPDHT AVLLAVELCS LSVPLVDPTV
PDLVVSALFG DGAGAVVVHG ADRRPARDDG RTPSAPRVRI VATRSELCPN THDVLGWHLG
PHGFRIVLTT ELADVVEREL GGVVKRFLAD HALQVPDVAA WVVHPGGPKV IDAVRDSLEL
PEERVATARA ALAETGNLSS ASIVHVLARE LAAPDAAPGP MVIVGLGPGV SIELLLLERL
G