Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2100 |
Symbol | |
ID | 8333445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2383508 |
End bp | 2384689 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644955250 |
Product | cell envelope-related transcriptional attenuator |
Protein accession | YP_003112860 |
Protein GI | 256391296 |
COG category | [K] Transcription |
COG ID | [COG1316] Transcriptional regulator |
TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGGTG GATATGGTGG TTGGACCCCG CAGGAGCCTG GTGGCTGGAT TCCGCCGGAG CCCGAGCCCA CCGTCGAGCT GCGGCCGCCG TCCAGGTGGG CTCAGCTGCG GGGGAGGTTG TCCGGGGGAC GGCGGGACGG GGGTGGTCCA CGTCCGCCGC GGGTGCGCCG GTTCAGCTGG CCGAAGCGGA TTCTGGCCGG CGGGCTGGTA CTGGTGTTGC TGGTCGGGGG TTACGCGACG TGGTTGTACT TCCACGCCTC CGGGGAGATC CGGCACGAGA ATGTGATCTC CGACTACCCG GGCCGTCCGG CCGAGGGCAA GGGGACGAAC TGGCTGCTGG TCGGCAGTGA CAGCCGGGAG GGGCTGACCT CGGACCAGGA GGACGCGCTG CACACCGGGA CCGGGGCGGT GACCGGGAAC ACCTCGCGGA CCGACTCGAT GATGATCCTG CACTCCGGGT CGAACGGGAC CTCGCTGATC AGCCTGCCGC GCGACTCCTA CGTCACCATC CCGGCCTGGA CCGACAGCAA GGGCAAGCAG CACGCGCTGT CGAAGAACAA GCTCAACGCC GCCTACGCCT TCGGCGACGC CCCGCTGCTG ATCAAGACCA TAGAGGTCAG CACCGGGGTG CGCATCGACC ACTTCGCCGA GGTCGGCTTC GGCGGCTTCG TGAAGGTCAC CGACGCCGTC GGCGGCGTGC ACCTGTGCCT GGACAAGCCG CTGAAGGACG AGCTGTCCGG CGCGGACCTG AAGGCCGGCT GCCAGACCCT CAACGGCGCC CAGGGGCTGG CCTACGTGCG CGACCGCTAC TCCGACCCGC TCGGCGACAT CGGCCGGATG CAGCGCCAGC GCACCTTCCT GGCGGCGCTG GCCCACAAGG TGTCCTCCAC GGGCGTGATC CTGAACCCGT TCAAGCTGGT CCCGGTCCTG GACAACTCGC TGGCCGCGTT CAAGGTCGAC AACGGCACGA ACCTGAGCGA CCTCTACGAC ATGTTCCAGC ACATGAAGGG CGTCAGCGGC AGCAACGGCC ACACCATCGT GGTGCCGATC GCGAACGAGG ACTACAACGT GCCGGGGGTC GGGTCCTGCA TCTTGTGGGA CAAGACGAAG GCCGGGCAGC TGTGGAGCGC GGTGATCAAC GACACCACGA TGCCGGCCTT GTCGGCGACC GGCGGGGTCT AG
|
Protein sequence | MSGGYGGWTP QEPGGWIPPE PEPTVELRPP SRWAQLRGRL SGGRRDGGGP RPPRVRRFSW PKRILAGGLV LVLLVGGYAT WLYFHASGEI RHENVISDYP GRPAEGKGTN WLLVGSDSRE GLTSDQEDAL HTGTGAVTGN TSRTDSMMIL HSGSNGTSLI SLPRDSYVTI PAWTDSKGKQ HALSKNKLNA AYAFGDAPLL IKTIEVSTGV RIDHFAEVGF GGFVKVTDAV GGVHLCLDKP LKDELSGADL KAGCQTLNGA QGLAYVRDRY SDPLGDIGRM QRQRTFLAAL AHKVSSTGVI LNPFKLVPVL DNSLAAFKVD NGTNLSDLYD MFQHMKGVSG SNGHTIVVPI ANEDYNVPGV GSCILWDKTK AGQLWSAVIN DTTMPALSAT GGV
|
| |