Gene Caci_2096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2096 
Symbol 
ID8333440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2379093 
End bp2380451 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content72% 
IMG OID644955245 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003112856 
Protein GI256391292 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAACGA TTCTGGTTGT CGGCGGCGGC TACGCGGGCT TCTATACCGC CTGGAAGCTG 
GAGAAGAAGC TCCGGCGGGA CGAGGCCCGC ATCATCGTCG TGGACCCCCG CCCCTACATG
ACCTACCAGC CCTTCCTCCC GGAAGTGCTG GCCGGATCGG TCGAGGCCCG CCACGCCGCG
GTGTCGCTGC GCCGGCATCT GCGCCGCAGC ACGATCGTCG CCGGCTCGGT CGTCGCGATC
GACCACGCGC GGCGCACCGT CACCGTCCGT CCCGCCGAGG GCCCGGAATT CGCGATCGAG
TACGACATCG TCGCGGTCAC CGCCGGTGCG GTCACGCGCA AGCTCGCCGT TCCCGGCGTC
GCGGAGCAGG CGATCGGCCT GAAGCACGTC GAGGAAGCGG TCGCGATCCG GGACCGGCTG
CTGACCGCCT TCGACCGGGC CTCGGCGCTC CCGCCGGGTC CGCGGCGCCA GGCGCTGCTC
ACCGCCACCT TCGTCGGCGG CGGGTTCTCC GGCGTCGAGG GCTTCGCCGA GCTGCTGTCC
CTGGCGAGCG CGCTGGTCCG GTCCTACCCG GAGCTCGACC CCGCCGAGCT GAACTTCCAC
CTGGTCGAGG CCGGGAAACG AATCCTTCCG GAGGTATCGG AGGAGCCCGG GAAGTGGGTG
GTGCGCTCGC TGGAGAAGCG CGGAGCGCGC GTGCACCTGG GTGCCACCTT GGTCTCGGCG
CTCGACGGCC ACGTGGTGCT GTCCACCGGC GAGGAGTTCG ACTCCGAACT GATCGTGTGG
ACCGTGGGCA ACGCCGCGAA CCCCATGGTC CGCAGCCACA CCGACCTGCC GATCGACCGG
CGCGGAATGC TCGTCGTGCG CTCCGACCTG CGGGTCGGCA CCGAGGACGC GCCGATCCCG
GACGCCTGGG GCGCGGGCGA CGACGCCGCC GTCCCGGACC TCGCCGCCGG CCGGCCCGGC
GCGACGACCG TGCCCAACGC CCAGCACGCC GTGCGCCAAG GCAAGCTGCT GGCGAAGAAC
ATCGCGGCCG CCCTGCGCGG ACGCGAGCCG AAACCCTATG TGCACCACAG CCTCGGCACC
GTCGCCACCC TCGGCCTCGG ACGCGGGATC TTCCAGTACC GTGGCCTCGT CATCAAGGGC
TTCCCGGCGT GGCTGATGCA CCGGGGGTAC CACGTCCTGG CGGTTCCGAG TTGGGAGCGG
AAGGTGCGGG TGTTCGCGAT CTGGCTCACC GCCGCGGTGT TCGGCCGCGA CATCGTCTCG
CTCGCATCCG TGCAGGATCC GCGCCGCGCG TTCGTCACCG GCGGGGAACC GCTGGAGGCG
CGGGCAGAGC CGCCGGGTTA TCGTGCGCGA TCCGAATGA
 
Protein sequence
MRTILVVGGG YAGFYTAWKL EKKLRRDEAR IIVVDPRPYM TYQPFLPEVL AGSVEARHAA 
VSLRRHLRRS TIVAGSVVAI DHARRTVTVR PAEGPEFAIE YDIVAVTAGA VTRKLAVPGV
AEQAIGLKHV EEAVAIRDRL LTAFDRASAL PPGPRRQALL TATFVGGGFS GVEGFAELLS
LASALVRSYP ELDPAELNFH LVEAGKRILP EVSEEPGKWV VRSLEKRGAR VHLGATLVSA
LDGHVVLSTG EEFDSELIVW TVGNAANPMV RSHTDLPIDR RGMLVVRSDL RVGTEDAPIP
DAWGAGDDAA VPDLAAGRPG ATTVPNAQHA VRQGKLLAKN IAAALRGREP KPYVHHSLGT
VATLGLGRGI FQYRGLVIKG FPAWLMHRGY HVLAVPSWER KVRVFAIWLT AAVFGRDIVS
LASVQDPRRA FVTGGEPLEA RAEPPGYRAR SE