Gene Caci_2084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2084 
Symbol 
ID8333428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2363991 
End bp2364818 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content68% 
IMG OID644955233 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003112844 
Protein GI256391280 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.446473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGACCG TTACCACTCG CGATGGTGTC GAACTCTTCT ACAAGGACTG GGGCGCCGGG 
CGCCCGGTGG TGTTCATCCA CGGCTGGCCG CTGAGCGGCG ACGCCTGGCA GGACCAGCTC
AAGGCGGTCG CCGACGCCGG TTTCCGCGGC ATCGCGCACG ACCGCCGCGG CCACGGACGC
TCCACCCCGG TGTGGGACGG CTACGACTTC GACACCTTCG CCGACGACCT GAACGACCTC
ATGACCGGGC TGGACCTGCG TGACGCCACC CTGGTCGCGC ACTCCATGGG CGGCGGCGAG
CTGGCCCGCT ACATCGGCCG GCACGGCACG TCGCGCGTGC GCTCGGCGGT CCTGCTCTCG
GCGATCACCC CGCTGATGCT CCAGTCGCCG ACCCTGCCCG AAGGCGTCCC GAAGGAGGCC
TTCCAGCAGA TCCAGGCGGG CATCATCAAC GAGCGCTCGC AGTTCTGGCA CGACACCGCG
GTCGCCTTCT TCTCCGCCAA CCGCGAGGGA ACCAAGGCCA CCCAGGGCAA CCAGGACGCC
TTCTGGCTCA TGGCCATGCA GGAGACCATC GAGGGCGGCG TGCAGTGCGT CGAGGCCTTC
ACCTACGGCG ACTTCACCGA CGACCTGAAG AAGTTCGACG TCCCGACCCT GCTGGTCCAC
GGCGACGACG ACCAGATCGT CCCGATCGAC GCGACCGCCC GCAAGGGAGT GAAGATCATC
TCCGACGCGA CCCTGAAGGT CTACGAGGGC GGCTCCCACG GACTCGCGCT CGTGCCGGGG
GACAAGGAGA AGTTCAACAA GGACCTGCTG GAGTTCCTCG CCAAGTAG
 
Protein sequence
MPTVTTRDGV ELFYKDWGAG RPVVFIHGWP LSGDAWQDQL KAVADAGFRG IAHDRRGHGR 
STPVWDGYDF DTFADDLNDL MTGLDLRDAT LVAHSMGGGE LARYIGRHGT SRVRSAVLLS
AITPLMLQSP TLPEGVPKEA FQQIQAGIIN ERSQFWHDTA VAFFSANREG TKATQGNQDA
FWLMAMQETI EGGVQCVEAF TYGDFTDDLK KFDVPTLLVH GDDDQIVPID ATARKGVKII
SDATLKVYEG GSHGLALVPG DKEKFNKDLL EFLAK