Gene Caci_2041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2041 
Symbol 
ID8333385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2310685 
End bp2311680 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content67% 
IMG OID644955191 
ProductRibonucleoside-diphosphate reductase 
Protein accessionYP_003112802 
Protein GI256391238 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0208] Ribonucleotide reductase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.202371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0413781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTCG ACCCGGGTCT CGACCTGACC CTGCGCCCGA TGCGCTACCC GCACTTCTTC 
GACCGCTACC GCGACGCGAT CAAGAACACC TGGACCGTGG AGGAGGTGGA CCTGCACAGC
GACCTCACGG ACCTCGACCG CCTCTCGGCC GCCGAGCGCC ACCTCGTCTC GCGCCTGGTC
GCCTTCTTCG CCACCGGCGA CACGATCGTC GCGAACAACC TCGTGCTGAA CCTGTACCAG
CACGTCAACA GCCCCGAGGG CCGGCTGTAC CTGTCGCGGC AGCTGTTCGA GGAGGCCGTG
CACGTCCAGT TCTACCTGAA CCTGCTCGAC ACCTACGTCC CCGACGAGGA CGAGCGCACC
GAGGCGTTCG CCGCCGTGGA GAACATCCCC TCGATCCGGC GCAAGGCAGA GTTCTGTTTC
CGCTGGATCG ACTCGCTGGG CAACCTCCAG CGGCTGGAGT CCCGCGAGGA CCGCCGGGCG
TTCCTGCTGA ACCTGATCTG CTTCGCGGCG TGCATCGAGG GACTGTTCTT CTACGGCGCC
TTCGCCTACG TCTACTTCCT GCGCTCGCGC GGTCTGCTGC ACGGACTGGC GTCCGGGACC
AACTGGGTCT TCCGCGACGA GTCGATGCAC ATGGCCTTCG CCTTCGACGT CGTCGACACG
GTGCGCGCCG AGGAGCCGGA CCTGTTCGAC GAGAAGATGG CTCAGCAGGT ACGCGAGATG
CTCGCCGAGG CCGTGGAGTG CGAGACGCAG TTCGCCGGGG ACCTGCTCGG CGGCGGAGTG
TCGGGGCTGC CGGTCGCGGA CATGCGCGCC TATCTCGAGC ACGTCGCCGA CCGGCGGCTG
GAGCAGCTCG GGCTGGAGCC GATGTACGGG ACGGCGAACC CGCTGGGGTT CATGGAGCTG
CAGGACGTAC AGGAGCTGTC GAACTTCTTC GAGCGGCGGG TCTCGGCCTA CCAGGTCGCG
GTCGGCGGTA GCGTCTCGTT CGACGACGAG TTCTGA
 
Protein sequence
MLLDPGLDLT LRPMRYPHFF DRYRDAIKNT WTVEEVDLHS DLTDLDRLSA AERHLVSRLV 
AFFATGDTIV ANNLVLNLYQ HVNSPEGRLY LSRQLFEEAV HVQFYLNLLD TYVPDEDERT
EAFAAVENIP SIRRKAEFCF RWIDSLGNLQ RLESREDRRA FLLNLICFAA CIEGLFFYGA
FAYVYFLRSR GLLHGLASGT NWVFRDESMH MAFAFDVVDT VRAEEPDLFD EKMAQQVREM
LAEAVECETQ FAGDLLGGGV SGLPVADMRA YLEHVADRRL EQLGLEPMYG TANPLGFMEL
QDVQELSNFF ERRVSAYQVA VGGSVSFDDE F