Gene Caci_2037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2037 
Symbol 
ID8333381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2307895 
End bp2308359 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content74% 
IMG OID644955187 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003112798 
Protein GI256391234 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00457383 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0572202 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC CTGTGAGACT GCACGTCATC CAAGGCGGCC GCGCCGAGCA GCCGACGAAG 
CAGCCGACGA AGCAGCCGAC GAACCATGCG CCGAGCCAGC CGCCGAACCA GCCCCCGAAG
CAGTCGGCGA CGCCCGAGCC GCTGTGGCGC GAAGTGCTGG GTGACCAGCT GCGCGAGCTG
CGGCGGGAGC ATCGGGAGAG TCTGGCCGAG ACCGCCGGTC GGGCTGGGAT CTCGCCGCAG
TACCTGTCAG AGGTGGAGCG GGGGCTCAAG GAGCCGTCGA GCGAGATGAT CGCGGCGGTC
GCCGGGGCGC TGGGGACGAC GCTCGGCGGG CTCGCGGAGT CGGTGGCCGG CGAGCTGCGG
GTCCGGCGCG AGGCCACCTT GGTGATCTCG CGGCGGGAGG CGGCGACGCG GGTGGCGACC
CGGCGTCCGG CCAGCGGTCC GGTGATGCTC GCGTTGGCGG CCTGA
 
Protein sequence
MTEPVRLHVI QGGRAEQPTK QPTKQPTNHA PSQPPNQPPK QSATPEPLWR EVLGDQLREL 
RREHRESLAE TAGRAGISPQ YLSEVERGLK EPSSEMIAAV AGALGTTLGG LAESVAGELR
VRREATLVIS RREAATRVAT RRPASGPVML ALAA