| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2035 |
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| Symbol | |
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| ID | 8333379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2306304 |
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| End bp | 2307050 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644955185 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003112796 |
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| Protein GI | 256391232 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000355798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0941785 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACC TGACCGGGAA GAGCGCGATC GTGACCGGCG GTGCGTCGGG GATCGGGCGG
GCGACCGCCG CGGTGCTGGC GGAGCTGGGT GCCGGGGTGG TGGTCGCCGA TCTGGACGCC
GAGCGGGGGG AGGAGGCGGC GAAGGAGGTC GGGGGTGTGT TCGTGCGCTG CGATGTGTCG
CGGGCGGCGG ACTGCGATGC TGTGGTGGAG GCTGCCGTCG GCGCGTATGG GGGTGTCGAC
GTGCTGTTCA ACAACGCCGG GATCATTCGG CGCTCGACGG TGCTGGACAT CGCCGAGGAC
GACTGGGATC TGGTGATGGC GGTCAATGTG AAGTCGATCC TGCTGATGAG CCGGCGGGTG
GTGCCGTTGA TGGCGGCGGC CGGGGGCGGG AGCATCGTCA ACACCGGGTC GGGGTGGGGG
ATCAAGGGCG GCGGGAGCGC GGTGTCGTAC TGCGCGTCGA AGGGGGCGGT GGTCAACATG
ACGCGGGCCA TGGCCATCGA CCACGGGCCG CAGAACATCC GGGTGAACTG CGTGTGCCCC
GGGGACACGG CGACCGGGAT GCTCGCCGAT GAGGCGCGGC AGCTGGGGGA GACGGTGGAT
TCCTTCTATG CTGACGCCGC CGATAGGCCG TTGGGACGGA TCGGGCAGCC GCGGGACATC
GCTCAGATGG TGGCGTTCCT GGCGTCCGAG GCGGCGGCTT TCGTGAGCGG CGCGGTGATT
CCCGTGGACG GCGCGGGGAC CGCATGA
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| Protein sequence | MIDLTGKSAI VTGGASGIGR ATAAVLAELG AGVVVADLDA ERGEEAAKEV GGVFVRCDVS
RAADCDAVVE AAVGAYGGVD VLFNNAGIIR RSTVLDIAED DWDLVMAVNV KSILLMSRRV
VPLMAAAGGG SIVNTGSGWG IKGGGSAVSY CASKGAVVNM TRAMAIDHGP QNIRVNCVCP
GDTATGMLAD EARQLGETVD SFYADAADRP LGRIGQPRDI AQMVAFLASE AAAFVSGAVI
PVDGAGTA
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