Gene Caci_2003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2003 
Symbol 
ID8333346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2267860 
End bp2268726 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content71% 
IMG OID644955152 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003112764 
Protein GI256391200 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0706427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAGA TCGAGCTCTC CGCAGGAGTC ATCGAGTACG AGGACCGCGG CGGCCCGGGT 
CCCACGGTCG TCTTGCTGCA CGGGCTGCTC ATGGACGAGA CGCTGTGGAC CGCGGTCGTC
GACGAGCTGG CGCCGCGGTT CCGTTGCGTG GTCCCGGTTC TGCCACTGGG AGCGCACCGC
AAGGCGATGA GCCCGGAAGC GGACCTGTCA CCCCTCGGAA TCGCGGCGCT GGTCGCCGAG
TTCCTGGACG CCCTCGACCT GCGCGACGTC ACGCTGGTCG GCAACGACAC CGGCGGCATG
CTCGTGCAGC TGCTGATGGC CGACGGAAGC AGGGAGCGGA TCGCCGGCGC GGTCCTGGTC
TCGTGCGACG CATTCGACAA CTTCCCGCCC GGCCTCACCG GCCGCACCCT GTTCCTCACC
GGCAAGCTCT CGCCGGCGCT GTTCGGCATG TTCATGCAGC AGATGCGCCT GAAGCCCGCA
CGCCGCATGC CGCTGTCCTT CGGCTGGCTG ACCAAGCGCG GCGACGCGAC CGTCAAGCGC
TGGCTGCGTC CCATCTGGCG CCAGCCGGAG ATCCGCCGCG ACACCGTCCG CGTCCTGCGC
ACCGCCGCAG CCGACCCGCA CATCCTCACC GCCGCCGCCG AGAAGCTGCC GAGCTTCGAC
CGCCCGACCC TGGTGGTGTG GGCACAAAAC GATCGCGTGA TGCCGCCGGA ACACGGCCGC
CGCCTCGCCG ACCTCCTCCC CGCCGCCCGC CTGGTCGAGA TCGGGGACAC CTACACCCTG
ATCCCCCTCG ACCAGCCGAC CCGCCTCGCG ACGGAGATCC GCAGCTTCGT CGCCGGGGAA
GTCAAAGCGG CGCGGGCGCG CCACTAG
 
Protein sequence
MNEIELSAGV IEYEDRGGPG PTVVLLHGLL MDETLWTAVV DELAPRFRCV VPVLPLGAHR 
KAMSPEADLS PLGIAALVAE FLDALDLRDV TLVGNDTGGM LVQLLMADGS RERIAGAVLV
SCDAFDNFPP GLTGRTLFLT GKLSPALFGM FMQQMRLKPA RRMPLSFGWL TKRGDATVKR
WLRPIWRQPE IRRDTVRVLR TAAADPHILT AAAEKLPSFD RPTLVVWAQN DRVMPPEHGR
RLADLLPAAR LVEIGDTYTL IPLDQPTRLA TEIRSFVAGE VKAARARH