| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1921 |
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| Symbol | |
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| ID | 8333264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2176059 |
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| End bp | 2177159 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644955070 |
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| Product | RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily |
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| Protein accession | YP_003112682 |
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| Protein GI | 256391118 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACTC GGGGGAGCGG TCCCGGTCCG GTTTCGTCCG GCCGAGGCGG GCCCGGGCGC
GACGGCGATC CGGTGCGCCC GGCGGCGGGC GAGCCCGCGG CGTCGGGGGC GTCCGGGGCG
TCGAGCGCCT CCGCCGCGCC TTCGGTGCCG GCCGCGCCGT CCGGGTCGGC TGCCCCGTCT
GTCCCGGCCG CTCCGGTCGC GCCGCGCGCT GTGCGCGCCG ACCGCCGGCT GCCGGAGCAG
GACGCCGACC TCCCCCTGCC GAGCATTCCC TCGCCGCGGC TCGGCGGCGT GCCGCGCGAC
CGCGCCGAGC ACCGCGCGGA GATCCACCGC CGTTTCGAGC TGCTGGCGGA CTGCGAGTCC
GACAGCGTGC GCCACCGGAC GCTGCGCGAC GAGCTGATCG CCGAGCACAT GAACTACGCG
CGCTACGTCG CCTCGCGCTT CTCCGTCCCC GCCGACACCG CCGAGGACCT GGAACAGGTC
GCGTACCTGG CGCTGATCAA GGCGGTCGAC AACTTCGACC CCGCGCGCGG CACCGCCTTC
CTGGGCTACC TCACGCCGAT GGTCGCCGGG GAGATCAAGC GCTATTTCCG CGACTCCACC
TGGGACGTGC ACGTCCCGCG CCGCATGCAG GAGTTGAGCC TGGCGCTGCA CGGCGCCCCG
GCCGAGCAGC TGGAGCGCCG GCTCGGCCGC TCCCCGACGA TCGCCGAGCT GGCCGAGCAC
CTCGGCGCGC AGCCGGAGGA GATCGTCGAG GCCTTCGACG CCTCGGCCGC CTACAGCGCG
ACCTCGCTGG AGCGTCCGCT GGTCCCCGGC GACGAGCAGG GCGCGAGCCT TGGCGAGACG
CTGGGCGGCG ACGACGACGC CTACGAGTGG GTCGTCGACC GTGAAGCGCT CAAGCCGCTG
CTGGCCGCGC TGCCGGAGAA GGACAAGCGG ATCCTGCTCA TGCGCTTTTT CCGCGGCATG
ACCCAGAGCC AGATAGGCAC CGAGCTGGGG GTGTCGCAGA TGCAGGTCTC GCGCTACCTG
ACCCGGATTC TCAGCACCCT GCGCGACGCG GTCCTCGTCG AGGACGGCGA AGAGGAGCCG
GGGGCGGGCG GCGGGAAGTG A
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| Protein sequence | MSTRGSGPGP VSSGRGGPGR DGDPVRPAAG EPAASGASGA SSASAAPSVP AAPSGSAAPS
VPAAPVAPRA VRADRRLPEQ DADLPLPSIP SPRLGGVPRD RAEHRAEIHR RFELLADCES
DSVRHRTLRD ELIAEHMNYA RYVASRFSVP ADTAEDLEQV AYLALIKAVD NFDPARGTAF
LGYLTPMVAG EIKRYFRDST WDVHVPRRMQ ELSLALHGAP AEQLERRLGR SPTIAELAEH
LGAQPEEIVE AFDASAAYSA TSLERPLVPG DEQGASLGET LGGDDDAYEW VVDREALKPL
LAALPEKDKR ILLMRFFRGM TQSQIGTELG VSQMQVSRYL TRILSTLRDA VLVEDGEEEP
GAGGGK
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